This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1vqr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1vqr" [edit=sysop:move=sysop])
Current revision (06:42, 25 January 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1vqr.png|left|200px]]
 
-
<!--
+
==Crystal structure of a virulence factor (cj0248) from campylobacter jejuni subsp. jejuni at 2.25 A resolution==
-
The line below this paragraph, containing "STRUCTURE_1vqr", creates the "Structure Box" on the page.
+
<StructureSection load='1vqr' size='340' side='right'caption='[[1vqr]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1vqr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VQR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VQR FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vqr OCA], [https://pdbe.org/1vqr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vqr RCSB], [https://www.ebi.ac.uk/pdbsum/1vqr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vqr ProSAT], [https://www.topsan.org/Proteins/JCSG/1vqr TOPSAN]</span></td></tr>
-
{{STRUCTURE_1vqr| PDB=1vqr | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of a virulence factor (cj0248) from campylobacter jejuni subsp. jejuni at 2.25 A resolution===
+
[https://www.uniprot.org/uniprot/Q0PBQ7_CAMJE Q0PBQ7_CAMJE]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
[[1vqr]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VQR OCA].
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vq/1vqr_consurf.spt"</scriptWhenChecked>
-
==Reference==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
<ref group="xtra">PMID:16287129</ref><references group="xtra"/>
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Campylobacter jejuni]]
+
</jmolCheckbox>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vqr ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]]
 +
[[Category: Large Structures]]

Current revision

Crystal structure of a virulence factor (cj0248) from campylobacter jejuni subsp. jejuni at 2.25 A resolution

PDB ID 1vqr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1vqr"
Personal tools