2pod
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2pod" size="350" color="white" frame="true" align="right" spinBox="true" caption="2pod, resolution 2.34Å" /> '''Crystal structure of...) |
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- | [[Image:2pod.jpg|left|200px]]<br /><applet load="2pod" size="350" color="white" frame="true" align="right" spinBox="true" | ||
- | caption="2pod, resolution 2.34Å" /> | ||
- | '''Crystal structure of a member of enolase superfamily from Burkholderia pseudomallei K96243'''<br /> | ||
- | == | + | ==Crystal structure of a member of enolase superfamily from Burkholderia pseudomallei K96243== |
- | + | <StructureSection load='2pod' size='340' side='right'caption='[[2pod]], [[Resolution|resolution]] 2.34Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2POD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2POD FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.34Å</td></tr> | |
- | [ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pod OCA], [https://pdbe.org/2pod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pod RCSB], [https://www.ebi.ac.uk/pdbsum/2pod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pod ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pod TOPSAN]</span></td></tr> | |
- | + | </table> | |
- | + | == Evolutionary Conservation == | |
- | + | [[Image:Consurf_key_small.gif|200px|right]] | |
- | + | Check<jmol> | |
- | + | <jmolCheckbox> | |
- | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/po/2pod_consurf.spt"</scriptWhenChecked> | |
- | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
- | + | <text>to colour the structure by Evolutionary Conservation</text> | |
- | [[ | + | </jmolCheckbox> |
- | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pod ConSurf]. | |
- | + | <div style="clear:both"></div> | |
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- | [ | + | |
- | [[ | + | |
- | [ | + | |
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- | + | ==See Also== | |
+ | *[[Enolase 3D structures|Enolase 3D structures]] | ||
+ | *[[Mandelate racemase|Mandelate racemase]] | ||
+ | *[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]] | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Almo SC]] | ||
+ | [[Category: Bonanno J]] | ||
+ | [[Category: Burley SK]] | ||
+ | [[Category: Gerlt J]] | ||
+ | [[Category: Gilmore JM]] | ||
+ | [[Category: Iizuka M]] | ||
+ | [[Category: Ozyurt S]] | ||
+ | [[Category: Patskovsky Y]] | ||
+ | [[Category: Sauder JM]] | ||
+ | [[Category: Smith D]] | ||
+ | [[Category: Wasserman SR]] |
Current revision
Crystal structure of a member of enolase superfamily from Burkholderia pseudomallei K96243
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Categories: Large Structures | Almo SC | Bonanno J | Burley SK | Gerlt J | Gilmore JM | Iizuka M | Ozyurt S | Patskovsky Y | Sauder JM | Smith D | Wasserman SR