|
|
(14 intermediate revisions not shown.) |
Line 1: |
Line 1: |
- | [[Image:2xg0.png|left|200px|thumb|Crystal Structure of Ribosomal protein L15 [[2xg0]]]]
| + | <StructureSection load='' size='350' side='right' scene='Ribosomal_protein_L15/Cv/1' caption='Ribosomal protein L15 (PDB code [[4v5k]])'> |
- | {{STRUCTURE_2xg0| PDB=2xg0 | SIZE=300| |right|CAPTION=Ribosomal protein L15 in ribosom 50S subunit with RNA fragments [[2xg0]] }}
| + | |
| | | |
- | '''Ribosomal protein L15''' (RPL15) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It binds to 23S RRNA. | + | '''Ribosomal protein L15''' (RPL15) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L15/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It binds to 23S RRNA<ref>PMID:11223259</ref>. |
| + | </StructureSection> |
| + | == References == |
| + | <references/> |
| | | |
- | | + | [[Category:Topic Page]] |
- | | + | |
- | {{TOC limit|limit=2}}
| + | |
- | | + | |
- | == 3D Structures of Ribosomal protein L15 ==
| + | |
- | | + | |
- | ===L15 in 50S subunit+RNA===
| + | |
- | | + | |
- | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy – TtRPL15 in 50S subunit+RNA fragments]] - Thermus thermophilus | + | |
- | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA
| + | |
- | [[3fin]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />
| + | |
- | [[2wwq – EcRPL15 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli
| + | |
- | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA
| + | |
- | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />
| + | |
- | [[3kcr]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase
| + | |
- | [[3bbo]] - RPL15 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach
| + | |
- | [[2zjq]], [[2zjr]], [[1nkw]] - DrRPL15 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans
| + | |
- | [[1kqs]], [[1qvg]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+CCA]] - Haloarcula marismortui
| + | |
- | [[1jj2]], [[1ffk]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA
| + | |
- | [[1q86]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+CCA-Phe-caproic acid-biotin
| + | |
- | [[1qvf]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA + deacylated tRNA minihelix
| + | |
- | [[3iy9 – RPL15 in 50S subunit – Leishmania taretolae
| + | |
- | | + | |
- | ===L15 in 50S subunit + antibiotics===
| + | |
- | | + | |
- | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - DrRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic
| + | |
- | [[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic
| + | |
- | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic
| + | |
- | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[1q7y]], [[1q81]], [[1q82]], [[3cxc]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+antibiotic ]] - Halobacterium marismortui
| + | |
- | [[1m90]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin
| + | |
- | | + | |
- | ===L15 in large + small ribosomal subunit===
| + | |
- | | + | |
- | [[1ml5]] - EcRPL15 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM<BR />
| + | |
- | | + | |
- | ===15 in 50S subunit + ribosome releasing factor (RRF)===
| + | |
- | | + | |
- | [[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+RRF
| + | |
- | [[2rdo]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<BR />
| + | |
- | | + | |
- | ===L15 in 50S subunit + various proteins]]]
| + | |
- | | + | |
- | [[2vhm]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix
| + | |
- | [[2j28]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<BR />
| + | |
- | [[1w2b]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
| + | |
- | | + | |
- | ===L15 in the 60S subunit===
| + | |
- | | + | |
- | [[3izr – RPL15 in the 60S subunit – wheat
| + | |
- | [[3o5h]], [[3o58]] - yRPL15 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast
| + | |
- | [[1s1i]] - yRPL15 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR />
| + | |
- | [[3jyw – RPL15 in 60S subunit – Cryo EM – Thermomyces lanuginosus
| + | |