3a0o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3a0o" [edit=sysop:move=sysop])
Current revision (13:59, 13 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3a0o.png|left|200px]]
 
-
<!--
+
==Crystal structure of alginate lyase from Agrobacterium tumefaciens C58==
-
The line below this paragraph, containing "STRUCTURE_3a0o", creates the "Structure Box" on the page.
+
<StructureSection load='3a0o' size='340' side='right'caption='[[3a0o]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3a0o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A0O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A0O FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
{{STRUCTURE_3a0o| PDB=3a0o | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a0o OCA], [https://pdbe.org/3a0o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a0o RCSB], [https://www.ebi.ac.uk/pdbsum/3a0o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a0o ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of alginate lyase from Agrobacterium tumefaciens C58===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A9CEJ9_AGRFC A9CEJ9_AGRFC]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_20507980}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 20507980 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/3a0o_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_20507980}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[3a0o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A0O OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a0o ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:20507980</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Agrobacterium tumefaciens]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: Hashimoto, W.]]
+
[[Category: Large Structures]]
-
[[Category: Mikami, B.]]
+
[[Category: Hashimoto W]]
-
[[Category: Murata, K.]]
+
[[Category: Mikami B]]
-
[[Category: Ochiai, A.]]
+
[[Category: Murata K]]
-
[[Category: Yamasaki, M.]]
+
[[Category: Ochiai A]]
 +
[[Category: Yamasaki M]]

Current revision

Crystal structure of alginate lyase from Agrobacterium tumefaciens C58

PDB ID 3a0o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3a0o"
Personal tools