This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2pg0
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2pg0" size="350" color="white" frame="true" align="right" spinBox="true" caption="2pg0, resolution 1.800Å" /> '''Crystal structure o...) |
|||
| (17 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2pg0.jpg|left|200px]]<br /><applet load="2pg0" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2pg0, resolution 1.800Å" /> | ||
| - | '''Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus'''<br /> | ||
| - | == | + | ==Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus== |
| - | + | <StructureSection load='2pg0' size='340' side='right'caption='[[2pg0]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2pg0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PG0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PG0 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr> | |
| - | [[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pg0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pg0 OCA], [https://pdbe.org/2pg0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pg0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pg0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pg0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2pg0 TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | [ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/Q5L0D5_GEOKA Q5L0D5_GEOKA] |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/2pg0_consurf.spt"</scriptWhenChecked> | |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [ | + | </jmolCheckbox> |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pg0 ConSurf]. | |
| - | [[ | + | <div style="clear:both"></div> |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | [ | + | |
| - | [[ | + | |
| - | [ | + | |
| - | + | ||
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Acyl-CoA dehydrogenase 3D structures|Acyl-CoA dehydrogenase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Geobacillus kaustophilus HTA426]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Chen L]] | ||
| + | [[Category: Chen L-Q]] | ||
| + | [[Category: Ebihara A]] | ||
| + | [[Category: Fu Z-Q]] | ||
| + | [[Category: Kuramitsu S]] | ||
| + | [[Category: Li Y]] | ||
| + | [[Category: Rose JP]] | ||
| + | [[Category: Shinkai A]] | ||
| + | [[Category: Wang B-C]] | ||
| + | [[Category: Yokoyama S]] | ||
| + | [[Category: Zhao M]] | ||
Current revision
Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus
| |||||||||||
Categories: Geobacillus kaustophilus HTA426 | Large Structures | Chen L | Chen L-Q | Ebihara A | Fu Z-Q | Kuramitsu S | Li Y | Rose JP | Shinkai A | Wang B-C | Yokoyama S | Zhao M
