This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ph3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2ph3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2ph3, resolution 1.910&Aring;" /> '''Crystal structure o...)
Current revision (11:01, 30 August 2023) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ph3.jpg|left|200px]]<br /><applet load="2ph3" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ph3, resolution 1.910&Aring;" />
 
-
'''Crystal structure of 3-oxoacyl-[acyl carrier protein] reductase TTHA0415 from Thermus thermophilus'''<br />
 
-
==About this Structure==
+
==Crystal structure of 3-oxoacyl-[acyl carrier protein] reductase TTHA0415 from Thermus thermophilus==
-
2PH3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Active as [http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PH3 OCA].
+
<StructureSection load='2ph3' size='340' side='right'caption='[[2ph3]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
-
[[Category: 3-oxoacyl-[acyl-carrier-protein] reductase]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2ph3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PH3 FirstGlance]. <br>
-
[[Category: Thermus thermophilus]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
-
[[Category: Chen, L.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ph3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ph3 OCA], [https://pdbe.org/2ph3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ph3 RCSB], [https://www.ebi.ac.uk/pdbsum/2ph3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ph3 ProSAT], [https://www.topsan.org/Proteins/RSGI/2ph3 TOPSAN]</span></td></tr>
-
[[Category: Chrzas, J.]]
+
</table>
-
[[Category: Ebihara, A.]]
+
== Function ==
-
[[Category: Fu, Z-Q.]]
+
[https://www.uniprot.org/uniprot/Q5SL78_THET8 Q5SL78_THET8]
-
[[Category: II, J.T.Swindell.]]
+
== Evolutionary Conservation ==
-
[[Category: Kuramitsu, S.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+
Check<jmol>
-
[[Category: Rose, J.P.]]
+
<jmolCheckbox>
-
[[Category: SECSG, Southeast.Collaboratory.for.Structural.Genomics.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ph/2ph3_consurf.spt"</scriptWhenChecked>
-
[[Category: Shinkai, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Wang, B.C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Yokoyama, S.]]
+
</jmolCheckbox>
-
[[Category: Zhu, J.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ph3 ConSurf].
-
[[Category: protein structure initiative]]
+
<div style="clear:both"></div>
-
[[Category: psi]]
+
__TOC__
-
[[Category: riken structural genomics/proteomics initiative]]
+
</StructureSection>
-
[[Category: rsgi]]
+
[[Category: Large Structures]]
-
[[Category: secsg]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: southeast collaboratory for structural genomics]]
+
[[Category: Chen L]]
-
[[Category: structural genomics]]
+
[[Category: Chrzas J]]
-
[[Category: thermus thermophilus]]
+
[[Category: Ebihara A]]
-
[[Category: ttha0415]]
+
[[Category: Fu Z-Q]]
-
 
+
[[Category: Kuramitsu S]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 15:22:00 2008''
+
[[Category: Rose JP]]
 +
[[Category: Shinkai A]]
 +
[[Category: Swindell II JT]]
 +
[[Category: Wang BC]]
 +
[[Category: Yokoyama S]]
 +
[[Category: Zhu J]]

Current revision

Crystal structure of 3-oxoacyl-[acyl carrier protein] reductase TTHA0415 from Thermus thermophilus

PDB ID 2ph3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools