2drj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2drj" size="350" color="white" frame="true" align="right" spinBox="true" caption="2drj, resolution 2.250&Aring;" /> '''Xray structure of a...)
Current revision (09:44, 25 December 2024) (edit) (undo)
 
(17 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2drj.gif|left|200px]]<br /><applet load="2drj" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2drj, resolution 2.250&Aring;" />
 
-
'''Xray structure of alpha-2,3/8-sialyltransferase CstII F91Y mutant'''<br />
 
-
==About this Structure==
+
==Xray structure of alpha-2,3/8-sialyltransferase CstII F91Y mutant==
-
2DRJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni] with <scene name='pdbligand=CSF:'>CSF</scene> and <scene name='pdbligand=IPA:'>IPA</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DRJ OCA].
+
<StructureSection load='2drj' size='340' side='right'caption='[[2drj]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2drj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DRJ FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSF:CYTIDINE-5-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC+ACID'>CSF</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2drj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2drj OCA], [https://pdbe.org/2drj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2drj RCSB], [https://www.ebi.ac.uk/pdbsum/2drj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2drj ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9LAK3_CAMJU Q9LAK3_CAMJU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/2drj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2drj ConSurf].
 +
<div style="clear:both"></div>
-
==Reference==
+
==See Also==
-
The charged sialic acid exhibits its power again: a new high-throughput screening technology., Wang PG, Nat Methods. 2006 Aug;3(8):589-90. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16862130 16862130]
+
*[[Sialyltransferase 3D structures|Sialyltransferase 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Campylobacter jejuni]]
[[Category: Campylobacter jejuni]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Chiu, C.P.C.]]
+
[[Category: Chiu CPC]]
-
[[Category: Strynadka, N.C.J.]]
+
[[Category: Strynadka NCJ]]
-
[[Category: CSF]]
+
-
[[Category: IPA]]
+
-
[[Category: mixed alpha/beta]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 15:33:59 2008''
+

Current revision

Xray structure of alpha-2,3/8-sialyltransferase CstII F91Y mutant

PDB ID 2drj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools