This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1zs7
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1zs7" size="350" color="white" frame="true" align="right" spinBox="true" caption="1zs7, resolution 1.85Å" /> '''The structure of gen...) |
|||
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1zs7.gif|left|200px]]<br /><applet load="1zs7" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1zs7, resolution 1.85Å" /> | ||
| - | '''The structure of gene product APE0525 from Aeropyrum pernix'''<br /> | ||
| - | == | + | ==The structure of gene product APE0525 from Aeropyrum pernix== |
| - | + | <StructureSection load='1zs7' size='340' side='right'caption='[[1zs7]], [[Resolution|resolution]] 1.85Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[1zs7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZS7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZS7 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zs7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zs7 OCA], [https://pdbe.org/1zs7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zs7 RCSB], [https://www.ebi.ac.uk/pdbsum/1zs7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zs7 ProSAT], [https://www.topsan.org/Proteins/MCSG/1zs7 TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | [[ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/Q9YEQ6_AERPE Q9YEQ6_AERPE] |
| - | [[ | + | == Evolutionary Conservation == |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zs/1zs7_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zs7 ConSurf]. | |
| - | + | <div style="clear:both"></div> | |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Aeropyrum pernix K1]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Cuff ME]] | ||
| + | [[Category: Edwards A]] | ||
| + | [[Category: Joachimiak A]] | ||
| + | [[Category: Savchenko A]] | ||
| + | [[Category: Skarina T]] | ||
Current revision
The structure of gene product APE0525 from Aeropyrum pernix
| |||||||||||

