This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1a5k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1a5k" [edit=sysop:move=sysop])
Current revision (06:27, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1a5k.png|left|200px]]
 
-
<!--
+
==K217E VARIANT OF KLEBSIELLA AEROGENES UREASE==
-
The line below this paragraph, containing "STRUCTURE_1a5k", creates the "Structure Box" on the page.
+
<StructureSection load='1a5k' size='340' side='right'caption='[[1a5k]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1a5k]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_aerogenes Klebsiella aerogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A5K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1A5K FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1a5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a5k OCA], [https://pdbe.org/1a5k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1a5k RCSB], [https://www.ebi.ac.uk/pdbsum/1a5k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1a5k ProSAT]</span></td></tr>
-
{{STRUCTURE_1a5k| PDB=1a5k | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/URE3_KLEAE URE3_KLEAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a5/1a5k_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1a5k ConSurf].
 +
<div style="clear:both"></div>
-
===K217E VARIANT OF KLEBSIELLA AEROGENES UREASE===
+
==See Also==
-
 
+
*[[Urease 3D structures|Urease 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_9558361}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 9558361 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_9558361}}
+
-
 
+
-
==About this Structure==
+
-
[[1a5k]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Klebsiella_aerogenes Klebsiella aerogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A5K OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:009558361</ref><references group="xtra"/>
+
[[Category: Klebsiella aerogenes]]
[[Category: Klebsiella aerogenes]]
-
[[Category: Urease]]
+
[[Category: Large Structures]]
-
[[Category: Hausinger, R P.]]
+
[[Category: Hausinger RP]]
-
[[Category: Karplus, P A.]]
+
[[Category: Karplus PA]]
-
[[Category: Michel, L O.]]
+
[[Category: Michel LO]]
-
[[Category: Pearson, M A.]]
+
[[Category: Pearson MA]]
-
[[Category: Schaller, R A.]]
+
[[Category: Schaller RA]]
-
[[Category: Mutant]]
+
-
[[Category: Nickel metalloenzyme]]
+

Current revision

K217E VARIANT OF KLEBSIELLA AEROGENES UREASE

PDB ID 1a5k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1a5k"
Personal tools