3iwv

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[[Image:3iwv.png|left|200px]]
 
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==Crystal structure of Y116T mutant of 5-HYDROXYISOURATE HYDROLASE (TRP)==
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The line below this paragraph, containing "STRUCTURE_3iwv", creates the "Structure Box" on the page.
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<StructureSection load='3iwv' size='340' side='right'caption='[[3iwv]], [[Resolution|resolution]] 1.68&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3iwv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IWV FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.68&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iwv OCA], [https://pdbe.org/3iwv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iwv RCSB], [https://www.ebi.ac.uk/pdbsum/3iwv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iwv ProSAT]</span></td></tr>
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{{STRUCTURE_3iwv| PDB=3iwv | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/HIUH_DANRE HIUH_DANRE] Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iw/3iwv_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iwv ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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5-Hydroxyisourate hydrolase (HIUase) and transthyretin (TTR) are closely related phylogenetically and structurally, while performing quite different functions. The former catalyzes the hydrolysis of 5-hydroxyisourate within the urate degradation pathway, and the latter is a carrier protein involved in the extracellular transport of thyroid hormones and in the cotransport of retinol. The evolution of HIUase into TTR represents a remarkable example of adaptation of a new function by active-site modification of an enzyme. On the basis of phylogenetic reconstructions and structural comparison of HIUase and TTR, two mutations (Y116T and I16A) were likely to be crucial events in order to induce, after a gene duplication event, the conversion of the enzyme into a binding protein. By rational reshaping of the active sites of HIUase and functional analyses of its mutant forms, we have provided insights into how its neofunctionalization could be achieved. We show here that the two mutations at the active sites of HIUase open up the two ends of the channel that transverses the entire tetrameric protein, generating two cavities accessible to the thyroxine molecule and abrogating, at the same time, the enzymatic activity. Our data indicate that a small number of critical mutations affecting the active site of an enzyme may be sufficient to generate a drastically different function, while a large number of additional mutations may be required for the fine-tuning of the structural and functional features of new proteins.
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===Crystal structure of Y116T mutant of 5-HYDROXYISOURATE HYDROLASE (TRP)===
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Probing the evolution of hydroxyisourate hydrolase into transthyretin through active-site redesign.,Cendron L, Ramazzina I, Percudani R, Rasore C, Zanotti G, Berni R J Mol Biol. 2011 Jun 17;409(4):504-12. Epub 2011 Apr 16. PMID:21515285<ref>PMID:21515285</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_16952372}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3iwv" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 16952372 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_16952372}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[3iwv]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IWV OCA].
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==Reference==
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<ref group="xtra">PMID:016952372</ref><references group="xtra"/>
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[[Category: Danio rerio]]
[[Category: Danio rerio]]
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[[Category: Hydroxyisourate hydrolase]]
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[[Category: Large Structures]]
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[[Category: Berni, R.]]
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[[Category: Berni R]]
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[[Category: Cendron, L.]]
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[[Category: Cendron L]]
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[[Category: Percudani, R.]]
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[[Category: Percudani R]]
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[[Category: Ramazzina, I.]]
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[[Category: Ramazzina I]]
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[[Category: Zanotti, G.]]
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[[Category: Zanotti G]]

Current revision

Crystal structure of Y116T mutant of 5-HYDROXYISOURATE HYDROLASE (TRP)

PDB ID 3iwv

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