This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3ruy
From Proteopedia
(Difference between revisions)
m (Protected "3ruy" [edit=sysop:move=sysop]) |
|||
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of the Ornithine-oxo acid transaminase RocD from Bacillus anthracis== | |
| - | + | <StructureSection load='3ruy' size='340' side='right'caption='[[3ruy]], [[Resolution|resolution]] 2.65Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3ruy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_ames_"ancestor" Bacillus anthracis ames "ancestor"]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RUY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RUY FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr> | |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rocD, BA_1154, GBAA_1154, BAS1071 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis Ames "Ancestor"])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ornithine_aminotransferase Ornithine aminotransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.13 2.6.1.13] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ruy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ruy OCA], [https://pdbe.org/3ruy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ruy RCSB], [https://www.ebi.ac.uk/pdbsum/3ruy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ruy ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/OAT_BACAN OAT_BACAN]] Catalyzes the interconversion of ornithine to glutamate semialdehyde (By similarity). | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bacillus anthracis ames ancestor]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Ornithine aminotransferase]] | ||
| + | [[Category: Anderson, S M]] | ||
| + | [[Category: Anderson, W F]] | ||
| + | [[Category: Brunzelle, J S]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Onopriyenko, O]] | ||
| + | [[Category: Peterson, S N]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Wawrzak, Z]] | ||
| + | [[Category: Alpha and beta protein]] | ||
| + | [[Category: Csgid]] | ||
| + | [[Category: Plp-dependent]] | ||
| + | [[Category: Transferase]] | ||
Current revision
Crystal Structure of the Ornithine-oxo acid transaminase RocD from Bacillus anthracis
| |||||||||||
