3oa9

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[[Image:3oa9.jpg|left|200px]]
 
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==Effector domain of influenza A/Duck/Albany/76 NS1==
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The line below this paragraph, containing "STRUCTURE_3oa9", creates the "Structure Box" on the page.
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<StructureSection load='3oa9' size='340' side='right'caption='[[3oa9]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3oa9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus_(A/duck/Alberta/60/1976(H12N5)) Influenza A virus (A/duck/Alberta/60/1976(H12N5))]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OA9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OA9 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oa9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oa9 OCA], [https://pdbe.org/3oa9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oa9 RCSB], [https://www.ebi.ac.uk/pdbsum/3oa9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oa9 ProSAT]</span></td></tr>
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{{STRUCTURE_3oa9| PDB=3oa9 | SCENE= }}
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</table>
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== Function ==
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===Effector domain of influenza A/Duck/Albany/76 NS1===
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[https://www.uniprot.org/uniprot/NS1_I76A2 NS1_I76A2] Inhibits post-transcriptional processing of cellular pre-mRNA, by binding and inhibiting two cellular proteins that are required for the 3'-end processing of cellular pre-mRNAs: the 30 kDa cleavage and polyadenylation specificity factor (CPSF4) and the poly(A)-binding protein 2 (PABPN1). This results in the accumulation of unprocessed 3' end pre-mRNAs which can't be exported from the nucleus. Cellular protein synthesis is thereby shut off very early after virus infection. Viral protein synthesis is not affected by the inhibition of the cellular 3' end processing machinery because the poly(A) tails of viral mRNAs are produced by the viral polymerase through a stuttering mechanism (By similarity). Prevents the establishment of the cellular antiviral state by inhibiting TRIM25-mediated DDX58 ubiquitination, which normally triggers the antiviral transduction signal that leads to the activation of type I IFN genes by transcription factors like IRF3 and IRF7. Prevents human EIF2AK2/PKR activation, either by binding double-strand RNA, or by interacting directly with EIF2AK2/PKR. This function may be important at the very beginning of the infection, when NS1 is mainly present in the cytoplasm. Also binds poly(A) and U6 snRNA. Suppresses the RNA silencing-based antiviral response in Drosophila cells (By similarity).
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Hale BG]]
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(as it appears on PubMed at http://www.pubmed.gov), where 21464929 is the PubMed ID number.
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[[Category: Hass C]]
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[[Category: Kerry PS]]
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{{ABSTRACT_PUBMED_21464929}}
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[[Category: Lewis A]]
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[[Category: Randall RE]]
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==About this Structure==
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[[Category: Russell RJM]]
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[[3oa9]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Influenza_a_virus Influenza a virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OA9 OCA].
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[[Category: Taylor MA]]
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==Reference==
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<ref group="xtra">PMID:021464929</ref><references group="xtra"/>
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[[Category: Influenza a virus]]
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[[Category: Hale, B G.]]
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[[Category: Hass, C.]]
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[[Category: Kerry, P S.]]
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[[Category: Lewis, A.]]
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[[Category: Randall, R E.]]
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[[Category: Russell, R J.M.]]
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[[Category: Taylor, M A.]]
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Current revision

Effector domain of influenza A/Duck/Albany/76 NS1

PDB ID 3oa9

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