This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2b0v
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2b0v" size="350" color="white" frame="true" align="right" spinBox="true" caption="2b0v, resolution 1.55Å" /> '''NUDIX hydrolase from...) |
|||
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2b0v.gif|left|200px]]<br /><applet load="2b0v" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2b0v, resolution 1.55Å" /> | ||
| - | '''NUDIX hydrolase from Nitrosomonas europaea.'''<br /> | ||
| - | == | + | ==NUDIX hydrolase from Nitrosomonas europaea.== |
| - | + | <StructureSection load='2b0v' size='340' side='right'caption='[[2b0v]], [[Resolution|resolution]] 1.55Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2b0v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B0V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B0V FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b0v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b0v OCA], [https://pdbe.org/2b0v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b0v RCSB], [https://www.ebi.ac.uk/pdbsum/2b0v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b0v ProSAT], [https://www.topsan.org/Proteins/MCSG/2b0v TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/Q82XR9_NITEU Q82XR9_NITEU] |
| - | [[ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b0/2b0v_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[ | + | </jmolCheckbox> |
| - | [ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b0v ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | + | ==See Also== | |
| + | *[[Nudix hydrolase 3D structures|Nudix hydrolase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Nitrosomonas europaea]] | ||
| + | [[Category: Edwards A]] | ||
| + | [[Category: Joachimiak A]] | ||
| + | [[Category: MCSG]] | ||
| + | [[Category: Osipiuk J]] | ||
| + | [[Category: Savchenko A]] | ||
| + | [[Category: Skarina T]] | ||
Current revision
NUDIX hydrolase from Nitrosomonas europaea.
| |||||||||||
