2bdv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2bdv" size="350" color="white" frame="true" align="right" spinBox="true" caption="2bdv, resolution 2.20&Aring;" /> '''X-Ray Crystal Struct...)
Current revision (07:52, 30 October 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2bdv.jpg|left|200px]]<br /><applet load="2bdv" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2bdv, resolution 2.20&Aring;" />
 
-
'''X-Ray Crystal Structure of Phage-related Protein BB2244 from Bordetella bronchiseptica. Northeast Structural Genomics Consortium Target BoR24.'''<br />
 
-
==About this Structure==
+
==X-Ray Crystal Structure of Phage-related Protein BB2244 from Bordetella bronchiseptica. Northeast Structural Genomics Consortium Target BoR24.==
-
2BDV is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bordetella_bronchiseptica Bordetella bronchiseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDV OCA].
+
<StructureSection load='2bdv' size='340' side='right'caption='[[2bdv]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
[[Category: Bordetella bronchiseptica]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2bdv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_bronchiseptica_RB50 Bordetella bronchiseptica RB50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BDV FirstGlance]. <br>
-
[[Category: Abashidze, M.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
[[Category: Acton, T.B.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Benach, J.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bdv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bdv OCA], [https://pdbe.org/2bdv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bdv RCSB], [https://www.ebi.ac.uk/pdbsum/2bdv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bdv ProSAT], [https://www.topsan.org/Proteins/NESGC/2bdv TOPSAN]</span></td></tr>
-
[[Category: Cooper, B.]]
+
</table>
-
[[Category: Forouhar, F.]]
+
== Function ==
-
[[Category: Hunt, J.F.]]
+
[https://www.uniprot.org/uniprot/A0A0H3LUS8_BORBR A0A0H3LUS8_BORBR]
-
[[Category: Janjua, H.]]
+
== Evolutionary Conservation ==
-
[[Category: Jayaraman, S.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Montelione, G.T.]]
+
Check<jmol>
-
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+
<jmolCheckbox>
-
[[Category: Tong, L.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/2bdv_consurf.spt"</scriptWhenChecked>
-
[[Category: Xiao, R.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: alpha-beta protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: nesg]]
+
</jmolCheckbox>
-
[[Category: northeast structural genomics consortium]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bdv ConSurf].
-
[[Category: protein structure initiative]]
+
<div style="clear:both"></div>
-
[[Category: psi]]
+
__TOC__
-
[[Category: structural genomics]]
+
</StructureSection>
-
 
+
[[Category: Bordetella bronchiseptica RB50]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 18:22:20 2008''
+
[[Category: Large Structures]]
 +
[[Category: Abashidze M]]
 +
[[Category: Acton TB]]
 +
[[Category: Benach J]]
 +
[[Category: Cooper B]]
 +
[[Category: Forouhar F]]
 +
[[Category: Hunt JF]]
 +
[[Category: Janjua H]]
 +
[[Category: Jayaraman S]]
 +
[[Category: Montelione GT]]
 +
[[Category: Tong L]]
 +
[[Category: Xiao R]]

Current revision

X-Ray Crystal Structure of Phage-related Protein BB2244 from Bordetella bronchiseptica. Northeast Structural Genomics Consortium Target BoR24.

PDB ID 2bdv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2bdv"
Personal tools