3gvn

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[[Image:3gvn.png|left|200px]]
 
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==The 1.2 Angstroem crystal structure of an E.coli tRNASer acceptor stem microhelix reveals two magnesium binding sites==
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The line below this paragraph, containing "STRUCTURE_3gvn", creates the "Structure Box" on the page.
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<StructureSection load='3gvn' size='340' side='right'caption='[[3gvn]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3gvn]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GVN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GVN FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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{{STRUCTURE_3gvn| PDB=3gvn | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gvn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gvn OCA], [https://pdbe.org/3gvn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gvn RCSB], [https://www.ebi.ac.uk/pdbsum/3gvn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gvn ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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tRNA identity elements assure the correct aminoacylation of tRNAs by the cognate aminoacyl-tRNA synthetases. tRNA(Ser) belongs to the so-called class II system, in which the identity elements are rather simple and are mostly located in the acceptor stem region, in contrast to 'class I', where tRNA determinants are more complex and are located within different regions of the tRNA. The structure of an Escherichia coli tRNA(Ser) acceptor stem microhelix was solved by high resolution X-ray structure analysis. The RNA crystallizes in the space group C2, with one molecule per asymmetric unit and with the cell constants a=35.79, b=39.13, c=31.37A, and beta=111.1 degrees . A defined hydration pattern of 97 water molecules surrounds the tRNA(Ser) acceptor stem microhelix. Additionally, two magnesium binding sites were detected in the tRNA(Ser) aminoacyl stem.
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===The 1.2 Angstroem crystal structure of an E.coli tRNASer acceptor stem microhelix reveals two magnesium binding sites===
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The 1.2A crystal structure of an E. coli tRNASer)acceptor stem microhelix reveals two magnesium binding sites.,Eichert A, Furste JP, Schreiber A, Perbandt M, Betzel C, Erdmann VA, Forster C Biochem Biophys Res Commun. 2009 Aug 21;386(2):368-73. Epub 2009 Jun 13. PMID:19527687<ref>PMID:19527687</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_19527687}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3gvn" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 19527687 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_19527687}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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[[3gvn]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GVN OCA].
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[[Category: Betzel C]]
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[[Category: Eichert A]]
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==Reference==
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[[Category: Erdmann VA]]
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<ref group="xtra">PMID:019527687</ref><references group="xtra"/>
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[[Category: Forster C]]
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[[Category: Betzel, C.]]
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[[Category: Furste JP]]
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[[Category: Eichert, A.]]
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[[Category: Perbandt M]]
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[[Category: Erdmann, V A.]]
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[[Category: Schreiber A]]
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[[Category: Forster, C.]]
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[[Category: Furste, J P.]]
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[[Category: Perbandt, M.]]
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[[Category: Schreiber, A.]]
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[[Category: Identity element]]
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[[Category: Magnesium binding site]]
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[[Category: Rna hydration]]
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[[Category: Trna acceptor stem microhelix]]
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[[Category: Trnaser/seryl-trna-synthetase]]
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[[Category: X-ray structure]]
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Current revision

The 1.2 Angstroem crystal structure of an E.coli tRNASer acceptor stem microhelix reveals two magnesium binding sites

PDB ID 3gvn

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