3ic7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3ic7" [edit=sysop:move=sysop])
Current revision (09:16, 30 October 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ic7.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Putative Transcriptional Regulator of GntR Family from Bacteroides thetaiotaomicron==
-
The line below this paragraph, containing "STRUCTURE_3ic7", creates the "Structure Box" on the page.
+
<StructureSection load='3ic7' size='340' side='right'caption='[[3ic7]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ic7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IC7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.819&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3ic7| PDB=3ic7 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ic7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ic7 OCA], [https://pdbe.org/3ic7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ic7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ic7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ic7 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of Putative Transcriptional Regulator of GntR Family from Bacteroides thetaiotaomicron===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8A870_BACTN Q8A870_BACTN]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[3ic7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IC7 OCA].
+
Check<jmol>
-
[[Category: Bacteria]]
+
<jmolCheckbox>
-
[[Category: Clancy, S.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/3ic7_consurf.spt"</scriptWhenChecked>
-
[[Category: Joachimiak, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Kim, Y.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmolCheckbox>
-
[[Category: Sather, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ic7 ConSurf].
-
[[Category: Tesar, C.]]
+
<div style="clear:both"></div>
-
[[Category: Dna-binding]]
+
__TOC__
-
[[Category: Helix-turn-helix]]
+
</StructureSection>
-
[[Category: Mcsg]]
+
[[Category: Bacteroides thetaiotaomicron VPI-5482]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Protein structure initiative]]
+
[[Category: Clancy S]]
-
[[Category: Psi-2]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
[[Category: Kim Y]]
-
[[Category: Transcription]]
+
[[Category: Sather A]]
-
[[Category: Transcription regulation]]
+
[[Category: Tesar C]]
-
[[Category: Unknown function]]
+

Current revision

Crystal Structure of Putative Transcriptional Regulator of GntR Family from Bacteroides thetaiotaomicron

PDB ID 3ic7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ic7"
Personal tools