This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3pqk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:33, 1 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3pqk.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa==
-
The line below this paragraph, containing "STRUCTURE_3pqk", creates the "Structure Box" on the page.
+
<StructureSection load='3pqk' size='340' side='right'caption='[[3pqk]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3pqk]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Xylella_fastidiosa Xylella fastidiosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PQK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PQK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3pqk| PDB=3pqk | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pqk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pqk OCA], [https://pdbe.org/3pqk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pqk RCSB], [https://www.ebi.ac.uk/pdbsum/3pqk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pqk ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/BIGR_XYLFA BIGR_XYLFA] Represses an operon that comprises itself, XF_0764, XF_0765, XF_0766 and blh. Binds to a palindromic AT-rich sequence spanning the -10 region of the blh promoter and blocks transcription of the operon.<ref>PMID:17586627</ref>
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
[[3pqk]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Xylella_fastidiosa Xylella fastidiosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PQK OCA].
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Xylella fastidiosa]]
[[Category: Xylella fastidiosa]]
-
[[Category: Benedetti, C E.]]
+
[[Category: Benedetti CE]]
-
[[Category: Guimaraes, B G.]]
+
[[Category: Guimaraes BG]]

Current revision

Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa

PDB ID 3pqk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools