3l4d

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[[Image:3l4d.png|left|200px]]
 
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==Crystal structure of sterol 14-alpha demethylase (CYP51) from Leishmania infantum in complex with fluconazole==
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The line below this paragraph, containing "STRUCTURE_3l4d", creates the "Structure Box" on the page.
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<StructureSection load='3l4d' size='340' side='right'caption='[[3l4d]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3l4d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_infantum Leishmania infantum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L4D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L4D FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=N8E:3,6,9,12,15-PENTAOXATRICOSAN-1-OL'>N8E</scene>, <scene name='pdbligand=TPF:2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL'>TPF</scene></td></tr>
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{{STRUCTURE_3l4d| PDB=3l4d | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l4d OCA], [https://pdbe.org/3l4d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l4d RCSB], [https://www.ebi.ac.uk/pdbsum/3l4d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l4d ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A2TEF2_LEIIN A2TEF2_LEIIN]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l4/3l4d_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l4d ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Leishmaniasis is a major health problem that affects populations of 88 countries worldwide, with no vaccine and only a few moderately effective drugs. Here we report structure/function characterization of sterol 14alpha-demethylase (CYP51) from Leishmania infantum. The enzyme catalyzes removal of the 14alpha-methyl group from sterol precursors. The reaction is essential for membrane biogenesis and therefore has great potential to become a target for antileishmanial chemotherapy. Although L. infantum CYP51 prefers C4-monomethylated sterol substrates, C4-norlanosterol and obtusifoliol (Vmax of 10 and 8 min-1, respectively), it is also found to 14alpha-demethylate C4-dimethylated lanosterol (Vmax=0.9 min-1) and C4-desmethylated 14alpha-methylzymosterol (Vmax =1.9 min-1). Binding parameters with six sterols were tested, the Kds ranging within 0.25-1.4 muM. Thus, L. infantum CYP51 is the first example of a plant-like sterol 14alpha-demethylase, where requirements toward the composition of the C4 atom substituents are not strict, indicative of possible branching in the postsqualene portion of sterol biosynthesis in the parasite. Comparative analysis of three CYP51 substrate binding cavities (Trypanosoma (T) brucei, T. cruzi and L. infantum) suggests that substrate preferences of plant- and fungal-like protozoan CYP51s largely depend on the differences in the enzyme active site topology. These minor structural differences are also likely to underlie CYP51 catalytic rates, drug susceptibility and can be used to design potent and specific inhibitors.
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===Crystal structure of sterol 14-alpha demethylase (CYP51) from Leishmania infantum in complex with fluconazole===
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Substrate preferences and catalytic parameters determined by structural characteristics of Sterol 14{alpha}-demethylase (CYP51) from Leishmania infantum.,Hargrove TY, Wawrzak Z, Liu J, Nes WD, Waterman MR, Lepesheva GI J Biol Chem. 2011 May 31. PMID:21632531<ref>PMID:21632531</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3l4d" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_21632531}}, adds the Publication Abstract to the page
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*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 21632531 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_21632531}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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[[3l4d]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_infantum Leishmania infantum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L4D OCA].
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==Reference==
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<ref group="xtra">PMID:021632531</ref><references group="xtra"/>
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[[Category: Leishmania infantum]]
[[Category: Leishmania infantum]]
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[[Category: Sterol 14-demethylase]]
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[[Category: Hargrove TY]]
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[[Category: Hargrove, T Y.]]
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[[Category: Lepesheva GI]]
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[[Category: Lepesheva, G I.]]
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[[Category: Waterman MR]]
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[[Category: Waterman, M R.]]
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[[Category: Wawrzak Z]]
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[[Category: Wawrzak, Z.]]
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[[Category: Cyp51]]
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[[Category: Endoplasmic reticulum]]
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[[Category: Heme]]
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[[Category: Iron]]
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[[Category: Lipid]]
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[[Category: Membrane]]
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[[Category: Monooxygenase]]
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[[Category: Obtusifoliol]]
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[[Category: Oxidoreductase]]
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[[Category: P450]]
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[[Category: Sterol 14-alpha demethylase]]
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[[Category: Sterol biosynthesis]]
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[[Category: Transmembrane protein]]
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Current revision

Crystal structure of sterol 14-alpha demethylase (CYP51) from Leishmania infantum in complex with fluconazole

PDB ID 3l4d

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