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2yg2

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[[Image:2yg2.jpg|left|200px]]
 
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==Structure of apolioprotein M in complex with Sphingosine 1-Phosphate==
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The line below this paragraph, containing "STRUCTURE_2yg2", creates the "Structure Box" on the page.
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<StructureSection load='2yg2' size='340' side='right'caption='[[2yg2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2yg2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YG2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YG2 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=S1P:(2S,3R,4E)-2-AMINO-3-HYDROXYOCTADEC-4-EN-1-YL+DIHYDROGEN+PHOSPHATE'>S1P</scene></td></tr>
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{{STRUCTURE_2yg2| PDB=2yg2 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yg2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yg2 OCA], [https://pdbe.org/2yg2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yg2 RCSB], [https://www.ebi.ac.uk/pdbsum/2yg2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yg2 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/APOM_HUMAN APOM_HUMAN] Probably involved in lipid transport. Can bind sphingosine-1-phosphate, myristic acid, palmitic acid and stearic acid, retinol, all-trans-retinoic acid and 9-cis-retinoic acid.<ref>PMID:17525477</ref> <ref>PMID:19733574</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Protection of the endothelium is provided by circulating sphingosine-1-phosphate (S1P), which maintains vascular integrity. We show that HDL-associated S1P is bound specifically to both human and murine apolipoprotein M (apoM). Thus, isolated human ApoM(+) HDL contained S1P, whereas ApoM(-) HDL did not. Moreover, HDL in Apom(-/-) mice contains no S1P, whereas HDL in transgenic mice overexpressing human apoM has an increased S1P content. The 1.7-A structure of the S1P-human apoM complex reveals that S1P interacts specifically with an amphiphilic pocket in the lipocalin fold of apoM. Human ApoM(+) HDL induced S1P(1) receptor internalization, downstream MAPK and Akt activation, endothelial cell migration, and formation of endothelial adherens junctions, whereas apoM(-) HDL did not. Importantly, lack of S1P in the HDL fraction of Apom(-/-) mice decreased basal endothelial barrier function in lung tissue. Our results demonstrate that apoM, by delivering S1P to the S1P(1) receptor on endothelial cells, is a vasculoprotective constituent of HDL.
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===STRUCTURE OF APOLIOPROTEIN M IN COMPLEX WITH SPHINGOSINE 1-PHOSPHATE===
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Endothelium-protective sphingosine-1-phosphate provided by HDL-associated apolipoprotein M.,Christoffersen C, Obinata H, Kumaraswamy SB, Galvani S, Ahnstrom J, Sevvana M, Egerer-Sieber C, Muller YA, Hla T, Nielsen LB, Dahlback B Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9613-8. Epub 2011 May 23. PMID:21606363<ref>PMID:21606363</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2yg2" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 21606363 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_21606363}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[2yg2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YG2 OCA].
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==Reference==
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<ref group="xtra">PMID:021606363</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Ahnstrom, J.]]
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[[Category: Large Structures]]
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[[Category: Christoffersen, C.]]
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[[Category: Ahnstrom J]]
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[[Category: Dahlback, B.]]
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[[Category: Christoffersen C]]
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[[Category: Egerer-Sieber, C.]]
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[[Category: Dahlback B]]
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[[Category: Galvani, S.]]
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[[Category: Egerer-Sieber C]]
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[[Category: Gowda, S.]]
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[[Category: Galvani S]]
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[[Category: Hla, T.]]
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[[Category: Gowda S]]
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[[Category: Muller, Y A.]]
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[[Category: Hla T]]
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[[Category: Nielsen, L.]]
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[[Category: Muller YA]]
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[[Category: Obinata, H.]]
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[[Category: Nielsen L]]
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[[Category: Sevvana, M.]]
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[[Category: Obinata H]]
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[[Category: Hdl]]
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[[Category: Sevvana M]]
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[[Category: Lipid transport]]
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[[Category: Lipocalin]]
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Current revision

Structure of apolioprotein M in complex with Sphingosine 1-Phosphate

PDB ID 2yg2

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