2xfg
From Proteopedia
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- | [[Image:2xfg.jpg|left|200px]] | ||
- | < | + | ==Reassembly and co-crystallization of a family 9 processive endoglucanase from separately expressed GH9 and CBM3c modules== |
- | + | <StructureSection load='2xfg' size='340' side='right'caption='[[2xfg]], [[Resolution|resolution]] 1.68Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[2xfg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XFG FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.679Å</td></tr> | |
- | -- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xfg OCA], [https://pdbe.org/2xfg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xfg RCSB], [https://www.ebi.ac.uk/pdbsum/2xfg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xfg ProSAT]</span></td></tr> | |
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/GUNI_ACET2 GUNI_ACET2] This enzyme catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans. Principally active against barley beta-glucan. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Non-cellulosomal processive endoglucanase 9I (Cel9I) from Clostridium thermocellum is a modular protein, consisting of a family-9 glycoside hydrolase (GH9) catalytic module and two family-3 carbohydrate-binding modules (CBM3c and CBM3b), separated by linker regions. GH9 does not show cellulase activity when expressed without CBM3c and CBM3b and the presence of the CBM3c was previously shown to be essential for endoglucanase activity. Physical reassociation of independently expressed GH9 and CBM3c modules (containing linker sequences) restored 60-70% of the intact Cel9I endocellulase activity. However, the mechanism responsible for recovery of activity remained unclear. In this work we independently expressed recombinant GH9 and CBM3c with and without their interconnecting linker in Escherichia coli. We crystallized and determined the molecular structure of the GH9/linker-CBM3c heterodimer at a resolution of 1.68 A to understand the functional and structural importance of the mutual spatial orientation of the modules and the role of the interconnecting linker during their re-association. Enzyme activity assays and isothermal titration calorimetry were performed to study and compare the effect of the linker on the re-association. The results indicated that reassembly of the modules could also occur without the linker, albeit with only very low recovery of endoglucanase activity. We propose that the linker regions in the GH9/CBM3c endoglucanases are important for spatial organization and fixation of the modules into functional enzymes. | ||
- | + | Reassembly and co-crystallization of a family 9 processive endoglucanase from its component parts: structural and functional significance of the intermodular linker.,Petkun S, Rozman Grinberg I, Lamed R, Jindou S, Burstein T, Yaniv O, Shoham Y, Shimon LJ, Bayer EA, Frolow F PeerJ. 2015 Sep 15;3:e1126. doi: 10.7717/peerj.1126. eCollection 2015. PMID:26401442<ref>PMID:26401442</ref> | |
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 2xfg" style="background-color:#fffaf0;"></div> | ||
- | == | + | ==See Also== |
- | [[ | + | *[[Glucanase 3D structures|Glucanase 3D structures]] |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: Bayer | + | __TOC__ |
- | [[Category: Burstein | + | </StructureSection> |
- | [[Category: Frolow | + | [[Category: Acetivibrio thermocellus]] |
- | [[Category: Jindou | + | [[Category: Large Structures]] |
- | [[Category: Lamed | + | [[Category: Bayer EA]] |
- | [[Category: Petkun | + | [[Category: Burstein T]] |
- | [[Category: Shimon | + | [[Category: Frolow F]] |
- | [[Category: Shoham | + | [[Category: Jindou S]] |
- | [[Category: Yaniv | + | [[Category: Lamed R]] |
- | + | [[Category: Petkun S]] | |
- | + | [[Category: Shimon JWL]] | |
- | + | [[Category: Shoham Y]] | |
- | + | [[Category: Yaniv O]] |
Current revision
Reassembly and co-crystallization of a family 9 processive endoglucanase from separately expressed GH9 and CBM3c modules
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Categories: Acetivibrio thermocellus | Large Structures | Bayer EA | Burstein T | Frolow F | Jindou S | Lamed R | Petkun S | Shimon JWL | Shoham Y | Yaniv O