This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ga1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2ga1" size="350" color="white" frame="true" align="right" spinBox="true" caption="2ga1, resolution 2.000&Aring;" /> '''Crystal structure o...)
Current revision (06:45, 25 January 2023) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ga1.gif|left|200px]]<br /><applet load="2ga1" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ga1, resolution 2.000&Aring;" />
 
-
'''Crystal structure of (YP_321193.1) from Anabaena variabilis ATCC 29413 at 2.00 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of a duf433 member protein (ava_0674) from anabaena variabilis atcc 29413 at 2.00 A resolution==
-
2GA1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Anabaena_variabilis Anabaena variabilis] with <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GA1 OCA].
+
<StructureSection load='2ga1' size='340' side='right'caption='[[2ga1]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
[[Category: Anabaena variabilis]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2ga1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichormus_variabilis_ATCC_29413 Trichormus variabilis ATCC 29413]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GA1 FirstGlance]. <br>
-
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: GOL]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ga1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ga1 OCA], [https://pdbe.org/2ga1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ga1 RCSB], [https://www.ebi.ac.uk/pdbsum/2ga1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ga1 ProSAT], [https://www.topsan.org/Proteins/JCSG/2ga1 TOPSAN]</span></td></tr>
-
[[Category: jcsg]]
+
</table>
-
[[Category: joint center for structural genomics]]
+
== Function ==
-
[[Category: protein structure initiative]]
+
[https://www.uniprot.org/uniprot/Q3MFD8_TRIV2 Q3MFD8_TRIV2]
-
[[Category: psi]]
+
== Evolutionary Conservation ==
-
[[Category: structural genomics]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: yp_321193.1]]
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 19:55:05 2008''
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/2ga1_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ga1 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Trichormus variabilis ATCC 29413]]

Current revision

Crystal structure of a duf433 member protein (ava_0674) from anabaena variabilis atcc 29413 at 2.00 A resolution

PDB ID 2ga1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools