2gge

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2gge" size="350" color="white" frame="true" align="right" spinBox="true" caption="2gge, resolution 1.890&Aring;" /> '''Crystal Structure o...)
Current revision (09:40, 30 August 2023) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gge.gif|left|200px]]<br /><applet load="2gge" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2gge, resolution 1.890&Aring;" />
 
-
'''Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A'''<br />
 
-
==About this Structure==
+
==Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A==
-
2GGE is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGE OCA].
+
<StructureSection load='2gge' size='340' side='right'caption='[[2gge]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
-
[[Category: Bacillus subtilis]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2gge]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GGE FirstGlance]. <br>
-
[[Category: Adams, J.M.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
-
[[Category: Almo, S.C.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
[[Category: Atwell, S.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gge OCA], [https://pdbe.org/2gge PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gge RCSB], [https://www.ebi.ac.uk/pdbsum/2gge PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gge ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2gge TOPSAN]</span></td></tr>
-
[[Category: Babbitt, P.]]
+
</table>
-
[[Category: Bain, K.T.]]
+
== Function ==
-
[[Category: Boice, A.]]
+
[https://www.uniprot.org/uniprot/YITF_BACSU YITF_BACSU]
-
[[Category: Burley, S.K.]]
+
== Evolutionary Conservation ==
-
[[Category: Dickey, M.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Emtage, S.]]
+
Check<jmol>
-
[[Category: Gerlt, J.A.]]
+
<jmolCheckbox>
-
[[Category: Gheyi, T.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/2gge_consurf.spt"</scriptWhenChecked>
-
[[Category: Groshong, C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Malashkevich, V.N.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
+
</jmolCheckbox>
-
[[Category: Ozyurt, S.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gge ConSurf].
-
[[Category: Pieper, U.]]
+
<div style="clear:both"></div>
-
[[Category: Powell, A.]]
+
-
[[Category: Reyes, C.]]
+
-
[[Category: Rooney, I.]]
+
-
[[Category: Rutter, M.E.]]
+
-
[[Category: Sali, A.]]
+
-
[[Category: Sauder, J.M.]]
+
-
[[Category: Schwinn, K.D.]]
+
-
[[Category: Thompson, D.A.]]
+
-
[[Category: Wasserman, S.R.]]
+
-
[[Category: CL]]
+
-
[[Category: MG]]
+
-
[[Category: consortium]]
+
-
[[Category: enolase]]
+
-
[[Category: mandelate racemase/muconate lactonizing enzyme]]
+
-
[[Category: new york structural genomics research]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc ]]
+
-
[[Category: octamer]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: proteinstructure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomics]]
+
-
[[Category: tim-barrel]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 19:58:47 2008''
+
==See Also==
 +
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus subtilis]]
 +
[[Category: Large Structures]]
 +
[[Category: Adams JM]]
 +
[[Category: Almo SC]]
 +
[[Category: Atwell S]]
 +
[[Category: Babbitt P]]
 +
[[Category: Bain KT]]
 +
[[Category: Boice A]]
 +
[[Category: Burley SK]]
 +
[[Category: Dickey M]]
 +
[[Category: Emtage S]]
 +
[[Category: Gerlt JA]]
 +
[[Category: Gheyi T]]
 +
[[Category: Groshong C]]
 +
[[Category: Malashkevich VN]]
 +
[[Category: Ozyurt S]]
 +
[[Category: Pieper U]]
 +
[[Category: Powell A]]
 +
[[Category: Reyes C]]
 +
[[Category: Rooney I]]
 +
[[Category: Rutter ME]]
 +
[[Category: Sali A]]
 +
[[Category: Sauder JM]]
 +
[[Category: Schwinn KD]]
 +
[[Category: Thompson DA]]
 +
[[Category: Wasserman SR]]

Current revision

Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A

PDB ID 2gge

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2gge"
Personal tools