This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3smr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3smr" [edit=sysop:move=sysop])
Current revision (13:01, 14 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3smr is ON HOLD
+
==Crystal structure of human WD repeat domain 5 with compound==
 +
<StructureSection load='3smr' size='340' side='right'caption='[[3smr]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3smr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SMR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SMR FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.82&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NP7:2-CHLORO-N-[2-(4-METHYLPIPERAZIN-1-YL)-5-NITROPHENYL]BENZAMIDE'>NP7</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3smr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3smr OCA], [https://pdbe.org/3smr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3smr RCSB], [https://www.ebi.ac.uk/pdbsum/3smr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3smr ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/WDR5_HUMAN WDR5_HUMAN] Contributes to histone modification. May position the N-terminus of histone H3 for efficient trimethylation at 'Lys-4'. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. May regulate osteoblasts differentiation.<ref>PMID:19556245</ref> <ref>PMID:19103755</ref> <ref>PMID:20018852</ref> <ref>PMID:16600877</ref> <ref>PMID:16829960</ref>
-
Authors: DONG,A., Dombrovski,L., Wasney,G.A., TEMPEL,W., Senisterra,G., Bolshan,Y., Smil,D., Nguyen,K.T., Hajian,T., Poda,G., Al-Awar,R., Bountra,C., Weigelt,J., Edwards,A.M., Brown,P.J., Schapira,M., Arrowsmith,C.H., Vedadi,M., WU,H., Structural Genomics Consortium (SGC)
+
==See Also==
-
 
+
*[[WD-repeat protein 3D structures|WD-repeat protein 3D structures]]
-
Description: Crystal structure of human WD repeat domain 5 with compound
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Al-Awar R]]
 +
[[Category: Arrowsmith CH]]
 +
[[Category: Bolshan Y]]
 +
[[Category: Bountra C]]
 +
[[Category: Brown PJ]]
 +
[[Category: Dombrovski L]]
 +
[[Category: Dong A]]
 +
[[Category: Edwards AM]]
 +
[[Category: Hajian T]]
 +
[[Category: Nguyen KT]]
 +
[[Category: Poda G]]
 +
[[Category: Schapira M]]
 +
[[Category: Senisterra G]]
 +
[[Category: Smil D]]
 +
[[Category: Tempel W]]
 +
[[Category: Vedadi M]]
 +
[[Category: Wasney GA]]
 +
[[Category: Weigelt J]]
 +
[[Category: Wu H]]

Current revision

Crystal structure of human WD repeat domain 5 with compound

PDB ID 3smr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools