2id1

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(New page: 200px<br /><applet load="2id1" size="350" color="white" frame="true" align="right" spinBox="true" caption="2id1, resolution 3.00&Aring;" /> '''X-Ray Crystal Struct...)
Current revision (22:24, 26 March 2025) (edit) (undo)
 
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[[Image:2id1.gif|left|200px]]<br /><applet load="2id1" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2id1, resolution 3.00&Aring;" />
 
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'''X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.'''<br />
 
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==About this Structure==
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==X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.==
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2ID1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum] with <scene name='pdbligand=IOD:'>IOD</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID1 OCA].
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<StructureSection load='2id1' size='340' side='right'caption='[[2id1]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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[[Category: Chromobacterium violaceum]]
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== Structural highlights ==
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[[Category: Single protein]]
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<table><tr><td colspan='2'>[[2id1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromobacterium_violaceum_ATCC_12472 Chromobacterium violaceum ATCC 12472]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ID1 FirstGlance]. <br>
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[[Category: Acton, T.B.]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
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[[Category: Baran, M.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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[[Category: Cunningham, K.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2id1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2id1 OCA], [https://pdbe.org/2id1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2id1 RCSB], [https://www.ebi.ac.uk/pdbsum/2id1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2id1 ProSAT], [https://www.topsan.org/Proteins/NESGC/2id1 TOPSAN]</span></td></tr>
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[[Category: Forouhar, F.]]
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</table>
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[[Category: Ho, C.K.]]
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== Function ==
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[[Category: Hunt, J.F.]]
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[https://www.uniprot.org/uniprot/IOJAP_CHRVO IOJAP_CHRVO] Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.[HAMAP-Rule:MF_01477]
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[[Category: Janjua, H.]]
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== Evolutionary Conservation ==
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[[Category: Liu, J.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Ma, L.C.]]
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Check<jmol>
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[[Category: Montelione, G.T.]]
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<jmolCheckbox>
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[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2id1_consurf.spt"</scriptWhenChecked>
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[[Category: Rost, B.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: Seetharaman, J.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Tong, L.]]
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</jmolCheckbox>
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[[Category: Xiao, R.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2id1 ConSurf].
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[[Category: Zhou, W.]]
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<div style="clear:both"></div>
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[[Category: IOD]]
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__TOC__
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[[Category: alpha-beta protein]]
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</StructureSection>
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[[Category: nesg]]
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[[Category: Chromobacterium violaceum ATCC 12472]]
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[[Category: northeast structural genomics consortium]]
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[[Category: Large Structures]]
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[[Category: protein structure initiative]]
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[[Category: Acton TB]]
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[[Category: psi-2]]
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[[Category: Baran M]]
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[[Category: structural genomics]]
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[[Category: Cunningham K]]
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[[Category: Forouhar F]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:39:05 2008''
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[[Category: Ho CK]]
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[[Category: Hunt JF]]
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[[Category: Janjua H]]
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[[Category: Liu J]]
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[[Category: Ma LC]]
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[[Category: Montelione GT]]
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[[Category: Rost B]]
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[[Category: Seetharaman J]]
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[[Category: Tong L]]
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[[Category: Xiao R]]
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[[Category: Zhou W]]

Current revision

X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.

PDB ID 2id1

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