3an3

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[[Image:3an3.jpg|left|200px]]
 
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==Human PPAR gamma ligand binding domain in complex with a gamma selective agonist MO3S==
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The line below this paragraph, containing "STRUCTURE_3an3", creates the "Structure Box" on the page.
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<StructureSection load='3an3' size='340' side='right'caption='[[3an3]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3an3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AN3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AN3 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=M7S:(2S)-2-BENZYL-3-(4-PROPOXY-3-{[({4-[(3S,5S,7S)-TRICYCLO[3.3.1.1~3,7~]DEC-1-YL]PHENYL}CARBONYL)AMINO]METHYL}PHENYL)PROPANOIC+ACID'>M7S</scene></td></tr>
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{{STRUCTURE_3an3| PDB=3an3 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3an3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3an3 OCA], [https://pdbe.org/3an3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3an3 RCSB], [https://www.ebi.ac.uk/pdbsum/3an3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3an3 ProSAT]</span></td></tr>
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</table>
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== Disease ==
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[https://www.uniprot.org/uniprot/PPARG_HUMAN PPARG_HUMAN] Note=Defects in PPARG can lead to type 2 insulin-resistant diabetes and hyptertension. PPARG mutations may be associated with colon cancer. Defects in PPARG may be associated with susceptibility to obesity (OBESITY) [MIM:[https://omim.org/entry/601665 601665]. It is a condition characterized by an increase of body weight beyond the limitation of skeletal and physical requirements, as the result of excessive accumulation of body fat.<ref>PMID:9753710</ref> Defects in PPARG are the cause of familial partial lipodystrophy type 3 (FPLD3) [MIM:[https://omim.org/entry/604367 604367]. Familial partial lipodystrophies (FPLD) are a heterogeneous group of genetic disorders characterized by marked loss of subcutaneous (sc) fat from the extremities. Affected individuals show an increased preponderance of insulin resistance, diabetes mellitus and dyslipidemia.<ref>PMID:12453919</ref> <ref>PMID:11788685</ref> Genetic variations in PPARG can be associated with susceptibility to glioma type 1 (GLM1) [MIM:[https://omim.org/entry/137800 137800]. Gliomas are central nervous system neoplasms derived from glial cells and comprise astrocytomas, glioblastoma multiforme, oligodendrogliomas, and ependymomas. Note=Polymorphic PPARG alleles have been found to be significantly over-represented among a cohort of American patients with sporadic glioblastoma multiforme suggesting a possible contribution to disease susceptibility.
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== Function ==
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[https://www.uniprot.org/uniprot/PPARG_HUMAN PPARG_HUMAN] Receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the receptor binds to a promoter element in the gene for acyl-CoA oxidase and activates its transcription. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. Acts as a critical regulator of gut homeostasis by suppressing NF-kappa-B-mediated proinflammatory responses.<ref>PMID:9065481</ref> <ref>PMID:16150867</ref> <ref>PMID:20829347</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Peroxisome proliferator-activated receptor gamma (PPARgamma) is a ligand-mediated transcription factor with roles in glucose, lipid, and lipoprotein homeostasis, and PPARgamma ligands are expected have therapeutic potential in these as well as other areas. We report here the design, synthesis, crystallographic analysis, and computational studies of alpha-benzylphenylpropanoic acid PPARgamma agonists. Interestingly, these compounds show a reversal of the stereochemistry-transactivation activity relationship observed with other phenylpropanoic acid ligands.
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===Human PPAR gamma ligand binding domain in complex with a gamma selective agonist MO3S===
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Design, Synthesis, and Structural Analysis of Phenylpropanoic Acid-Type PPARgamma-Selective Agonists: Discovery of Reversed Stereochemistry-Activity Relationship.,Ohashi M, Oyama T, Nakagome I, Satoh M, Nishio Y, Nobusada H, Hirono S, Morikawa K, Hashimoto Y, Miyachi H J Med Chem. 2010 Dec 3. PMID:21128600<ref>PMID:21128600</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3an3" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_21128600}}, adds the Publication Abstract to the page
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*[[Peroxisome proliferator-activated receptor 3D structures|Peroxisome proliferator-activated receptor 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 21128600 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_21128600}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[3an3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AN3 OCA].
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==Reference==
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<ref group="xtra">PMID:021128600</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Miyachi, H.]]
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[[Category: Large Structures]]
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[[Category: Morikawa, K.]]
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[[Category: Miyachi H]]
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[[Category: Ohashi, M.]]
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[[Category: Morikawa K]]
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[[Category: Oyama, T.]]
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[[Category: Ohashi M]]
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[[Category: Waku, T.]]
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[[Category: Oyama T]]
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[[Category: Mainly alpha]]
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[[Category: Waku T]]
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[[Category: Nuclear receptor]]
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[[Category: Transcription]]
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Current revision

Human PPAR gamma ligand binding domain in complex with a gamma selective agonist MO3S

PDB ID 3an3

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