This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3pqj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:42, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3pqj.png|left|200px]]
 
-
<!--
+
==Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa==
-
The line below this paragraph, containing "STRUCTURE_3pqj", creates the "Structure Box" on the page.
+
<StructureSection load='3pqj' size='340' side='right'caption='[[3pqj]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3pqj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Xylella_fastidiosa Xylella fastidiosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PQJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PQJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.48&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pqj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pqj OCA], [https://pdbe.org/3pqj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pqj RCSB], [https://www.ebi.ac.uk/pdbsum/3pqj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pqj ProSAT]</span></td></tr>
-
{{STRUCTURE_3pqj| PDB=3pqj | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa===
+
[https://www.uniprot.org/uniprot/BIGR_XYLFA BIGR_XYLFA] Represses an operon that comprises itself, XF_0764, XF_0765, XF_0766 and blh. Binds to a palindromic AT-rich sequence spanning the -10 region of the blh promoter and blocks transcription of the operon.<ref>PMID:17586627</ref>
-
 
+
== References ==
-
 
+
<references/>
-
<!--
+
__TOC__
-
The line below this paragraph, {{ABSTRACT_PUBMED_21632538}}, adds the Publication Abstract to the page
+
</StructureSection>
-
(as it appears on PubMed at http://www.pubmed.gov), where 21632538 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
-
{{ABSTRACT_PUBMED_21632538}}
+
-
 
+
-
==About this Structure==
+
-
[[3pqj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Xylella_fastidiosa Xylella fastidiosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PQJ OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:021632538</ref><references group="xtra"/>
+
[[Category: Xylella fastidiosa]]
[[Category: Xylella fastidiosa]]
-
[[Category: Benedetti, C E.]]
+
[[Category: Benedetti CE]]
-
[[Category: Guimaraes, B G.]]
+
[[Category: Guimaraes BG]]
-
[[Category: Dna binding]]
+
-
[[Category: Helix-turn-helix motif]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcriptional repressor]]
+
-
[[Category: Winged-helix fold]]
+

Current revision

Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa

PDB ID 3pqj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3pqj"
Personal tools