2oas

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2oas" size="350" color="white" frame="true" align="right" spinBox="true" caption="2oas, resolution 2.40&Aring;" /> '''Crystal Structure of...)
Current revision (08:23, 30 October 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2oas.gif|left|200px]]<br /><applet load="2oas" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2oas, resolution 2.40&Aring;" />
 
-
'''Crystal Structure of 4-hydroxybutyrate coenzyme A transferase (AtoA) in complex with CoA from Shewanella oneidensis, Northeast Structural Genomics Target SoR119.'''<br />
 
-
==About this Structure==
+
==Crystal Structure of 4-hydroxybutyrate coenzyme A transferase (AtoA) in complex with CoA from Shewanella oneidensis, Northeast Structural Genomics Target SoR119.==
-
2OAS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Shewanella_oneidensis Shewanella oneidensis] with <scene name='pdbligand=COA:'>COA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OAS OCA].
+
<StructureSection load='2oas' size='340' side='right'caption='[[2oas]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
[[Category: Shewanella oneidensis]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2oas]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_oneidensis_MR-1 Shewanella oneidensis MR-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OAS FirstGlance]. <br>
-
[[Category: Acton, T.B.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
[[Category: Baran, M.C.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Benach, J.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oas OCA], [https://pdbe.org/2oas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oas RCSB], [https://www.ebi.ac.uk/pdbsum/2oas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oas ProSAT], [https://www.topsan.org/Proteins/NESGC/2oas TOPSAN]</span></td></tr>
-
[[Category: Cunningham, K.]]
+
</table>
-
[[Category: Fang, Y.]]
+
== Function ==
-
[[Category: Forouhar, F.]]
+
[https://www.uniprot.org/uniprot/Q8EG98_SHEON Q8EG98_SHEON]
-
[[Category: Hunt, J.F.]]
+
== Evolutionary Conservation ==
-
[[Category: Hussain, M.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Liu, J.]]
+
Check<jmol>
-
[[Category: Ma, L.C.]]
+
<jmolCheckbox>
-
[[Category: Montelione, G.T.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/2oas_consurf.spt"</scriptWhenChecked>
-
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Neely, H.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Owen, L.]]
+
</jmolCheckbox>
-
[[Category: Seetharaman, J.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oas ConSurf].
-
[[Category: Tong, L.]]
+
<div style="clear:both"></div>
-
[[Category: Xiao, R.]]
+
__TOC__
-
[[Category: COA]]
+
</StructureSection>
-
[[Category: alpha beta protein]]
+
[[Category: Large Structures]]
-
[[Category: nesg]]
+
[[Category: Shewanella oneidensis MR-1]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Acton TB]]
-
[[Category: protein structure initiative]]
+
[[Category: Baran MC]]
-
[[Category: psi-2]]
+
[[Category: Benach J]]
-
[[Category: structural genomics]]
+
[[Category: Cunningham K]]
-
 
+
[[Category: Fang Y]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:08:13 2008''
+
[[Category: Forouhar F]]
 +
[[Category: Hunt JF]]
 +
[[Category: Hussain M]]
 +
[[Category: Liu J]]
 +
[[Category: Ma LC]]
 +
[[Category: Montelione GT]]
 +
[[Category: Neely H]]
 +
[[Category: Owen L]]
 +
[[Category: Seetharaman J]]
 +
[[Category: Tong L]]
 +
[[Category: Xiao R]]

Current revision

Crystal Structure of 4-hydroxybutyrate coenzyme A transferase (AtoA) in complex with CoA from Shewanella oneidensis, Northeast Structural Genomics Target SoR119.

PDB ID 2oas

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2oas"
Personal tools