2obk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2obk" size="350" color="white" frame="true" align="right" spinBox="true" caption="2obk, resolution 2.70&Aring;" /> '''X-Ray structure of t...)
Current revision (10:34, 30 August 2023) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2obk.gif|left|200px]]<br /><applet load="2obk" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2obk, resolution 2.70&Aring;" />
 
-
'''X-Ray structure of the putative Se binding protein from Pseudomonas fluorescens. Northeast Structural Genomics Consortium target PlR6.'''<br />
 
-
==About this Structure==
+
==X-Ray structure of the putative Se binding protein from Pseudomonas fluorescens. Northeast Structural Genomics Consortium target PlR6.==
-
2OBK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OBK OCA].
+
<StructureSection load='2obk' size='340' side='right'caption='[[2obk]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
[[Category: Pseudomonas fluorescens]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2obk]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_protegens_Pf-5 Pseudomonas protegens Pf-5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OBK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OBK FirstGlance]. <br>
-
[[Category: Acton, T.B.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
[[Category: Baran, M.C.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Chen, C.X.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2obk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2obk OCA], [https://pdbe.org/2obk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2obk RCSB], [https://www.ebi.ac.uk/pdbsum/2obk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2obk ProSAT], [https://www.topsan.org/Proteins/NESGC/2obk TOPSAN]</span></td></tr>
-
[[Category: Cunningham, K.]]
+
</table>
-
[[Category: Fang, Y.]]
+
== Function ==
-
[[Category: Hunt, J.F.]]
+
[https://www.uniprot.org/uniprot/Q4KGC5_PSEF5 Q4KGC5_PSEF5]
-
[[Category: Kuzin, A.P.]]
+
== Evolutionary Conservation ==
-
[[Category: Liu, J.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Ma, L.C.]]
+
Check<jmol>
-
[[Category: Montelione, G.T.]]
+
<jmolCheckbox>
-
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ob/2obk_consurf.spt"</scriptWhenChecked>
-
[[Category: Rost, B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Seetharaman, J.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Su, M.]]
+
</jmolCheckbox>
-
[[Category: Tong, L.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2obk ConSurf].
-
[[Category: Xiao, R.]]
+
<div style="clear:both"></div>
-
[[Category: northeast structural genomics consortium]]
+
__TOC__
-
[[Category: protein structure initiative]]
+
</StructureSection>
-
[[Category: psi-2]]
+
[[Category: Large Structures]]
-
[[Category: structural genomics]]
+
[[Category: Pseudomonas protegens Pf-5]]
-
[[Category: x-ray nesg plr6 q4kgc5]]
+
[[Category: Acton TB]]
-
 
+
[[Category: Baran MC]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:08:32 2008''
+
[[Category: Chen CX]]
 +
[[Category: Cunningham K]]
 +
[[Category: Fang Y]]
 +
[[Category: Hunt JF]]
 +
[[Category: Kuzin AP]]
 +
[[Category: Liu J]]
 +
[[Category: Ma LC]]
 +
[[Category: Montelione GT]]
 +
[[Category: Rost B]]
 +
[[Category: Seetharaman J]]
 +
[[Category: Su M]]
 +
[[Category: Tong L]]
 +
[[Category: Xiao R]]

Current revision

X-Ray structure of the putative Se binding protein from Pseudomonas fluorescens. Northeast Structural Genomics Consortium target PlR6.

PDB ID 2obk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools