This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3t7r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3t7r" [edit=sysop:move=sysop])
Current revision (17:29, 1 November 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3t7r is ON HOLD
+
==Crystal structure of apo BVU_3255, a methyltransferase from Bacteroides vulgatus ATCC 8482==
 +
<StructureSection load='3t7r' size='340' side='right'caption='[[3t7r]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3t7r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Phocaeicola_vulgatus_ATCC_8482 Phocaeicola vulgatus ATCC 8482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T7R FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6PP:3-[(2Z)-3-METHYLPENT-2-EN-1-YL]BENZENE-1,2-DIOL'>6PP</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t7r OCA], [https://pdbe.org/3t7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t7r RCSB], [https://www.ebi.ac.uk/pdbsum/3t7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t7r ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A6L5C0_PHOV8 A6L5C0_PHOV8]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Methylation is important for various cellular activities. To date, there is no report of any methyltransferase structure from the human intestine antibiotic resistant pathogen Bacteroides vulgatus. The protein BVU_3255 from B. vulgatus ATCC 8482 belongs to a SAM-dependent methyltransferase. Here, we report the crystal structure of apo BVU_3255, and its complexes with SAM and SAH, which revealed a typical class I Rossmann Fold Methyltransferase. Isothermal titration calorimetric studies showed that both SAM and SAH bind with equal affinity. The structural and sequence analysis suggested that BVU_3255 is a small molecule methyltransferase and involved in methylating the intermediates in ubiquinone biosynthesis pathway.
-
Authors: V. Kumar, J. Sivaraman
+
Structural characterization of BVU_3255, a methyltransferase from human intestine antibiotic resistant pathogen Bacteroides vulgatus.,Kumar V, Sivaraman J J Struct Biol. 2011 Aug 22. PMID:21872662<ref>PMID:21872662</ref>
-
Description: Crystal structure of apo BVU_3255, a methyltransferase from Bacteroides vulgatus ATCC 8482
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 3t7r" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Phocaeicola vulgatus ATCC 8482]]
 +
[[Category: Kumar V]]
 +
[[Category: Sivaraman J]]

Current revision

Crystal structure of apo BVU_3255, a methyltransferase from Bacteroides vulgatus ATCC 8482

PDB ID 3t7r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools