2oo6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2oo6" size="350" color="white" frame="true" align="right" spinBox="true" caption="2oo6, resolution 1.80&Aring;" /> '''Crystal structure of...)
Current revision (00:21, 28 December 2023) (edit) (undo)
 
(18 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2oo6.gif|left|200px]]<br /><applet load="2oo6" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2oo6, resolution 1.80&Aring;" />
 
-
'''Crystal structure of hypothetical L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400'''<br />
 
-
==About this Structure==
+
==Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400==
-
2OO6 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Burkholderia_xenovorans Burkholderia xenovorans] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OO6 OCA].
+
<StructureSection load='2oo6' size='340' side='right'caption='[[2oo6]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
[[Category: Burkholderia xenovorans]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2oo6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paraburkholderia_xenovorans_LB400 Paraburkholderia xenovorans LB400]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OO6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OO6 FirstGlance]. <br>
-
[[Category: Almo, S.C.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
[[Category: Atwell, S.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: Bain, K.T.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oo6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oo6 OCA], [https://pdbe.org/2oo6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oo6 RCSB], [https://www.ebi.ac.uk/pdbsum/2oo6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oo6 ProSAT]</span></td></tr>
-
[[Category: Bonanno, J.B.]]
+
</table>
-
[[Category: Burley, S.K.]]
+
== Function ==
-
[[Category: Dickey, M.]]
+
[https://www.uniprot.org/uniprot/Q13PB7_PARXL Q13PB7_PARXL]
-
[[Category: Freeman, J.]]
+
== Evolutionary Conservation ==
-
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Sauder, M.J.]]
+
Check<jmol>
-
[[Category: Smyth, L.]]
+
<jmolCheckbox>
-
[[Category: Sridhar, V.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/2oo6_consurf.spt"</scriptWhenChecked>
-
[[Category: Wu, B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: SO4]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: enolase]]
+
</jmolCheckbox>
-
[[Category: new york structural genomix research consortium]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oo6 ConSurf].
-
[[Category: nysgxrc]]
+
<div style="clear:both"></div>
-
[[Category: protein structure initiative]]
+
__TOC__
-
[[Category: psi-2]]
+
</StructureSection>
-
[[Category: structural genomics]]
+
[[Category: Large Structures]]
-
 
+
[[Category: Paraburkholderia xenovorans LB400]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:13:58 2008''
+
[[Category: Almo SC]]
 +
[[Category: Atwell S]]
 +
[[Category: Bain KT]]
 +
[[Category: Bonanno JB]]
 +
[[Category: Burley SK]]
 +
[[Category: Dickey M]]
 +
[[Category: Freeman J]]
 +
[[Category: Sauder JM]]
 +
[[Category: Smyth L]]
 +
[[Category: Sridhar V]]
 +
[[Category: Wu B]]

Current revision

Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400

PDB ID 2oo6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2oo6"
Personal tools