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2ooj
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2ooj" size="350" color="white" frame="true" align="right" spinBox="true" caption="2ooj, resolution 1.840Å" /> '''Crystal structure o...) |
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| - | [[Image:2ooj.gif|left|200px]]<br /><applet load="2ooj" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2ooj, resolution 1.840Å" /> | ||
| - | '''Crystal structure of a protein of unknown function (NP_717203.1) from Shewanella oneidensis at 1.84 A resolution'''<br /> | ||
| - | == | + | ==CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF3224 FAMILY (SO_1590) FROM SHEWANELLA ONEIDENSIS MR-1 AT 1.84 A RESOLUTION== |
| - | + | <StructureSection load='2ooj' size='340' side='right'caption='[[2ooj]], [[Resolution|resolution]] 1.84Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[2ooj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_oneidensis_MR-1 Shewanella oneidensis MR-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OOJ FirstGlance]. <br> | |
| - | [ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ooj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ooj OCA], [https://pdbe.org/2ooj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ooj RCSB], [https://www.ebi.ac.uk/pdbsum/2ooj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ooj ProSAT], [https://www.topsan.org/Proteins/JCSG/2ooj TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/Q8EGL1_SHEON Q8EGL1_SHEON] |
| - | [[ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/2ooj_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ooj ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Shewanella oneidensis MR-1]] | ||
Current revision
CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF3224 FAMILY (SO_1590) FROM SHEWANELLA ONEIDENSIS MR-1 AT 1.84 A RESOLUTION
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