2p84

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2p84" size="350" color="white" frame="true" align="right" spinBox="true" caption="2p84, resolution 1.80&Aring;" /> '''Crystal structure of...)
Current revision (09:08, 21 February 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2p84.jpg|left|200px]]<br /><applet load="2p84" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2p84, resolution 1.80&Aring;" />
 
-
'''Crystal structure of ORF041 from Bacteriophage 37'''<br />
 
-
==About this Structure==
+
==Crystal structure of ORF041 from Bacteriophage 37==
-
2P84 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_phage_187 Staphylococcus phage 187]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P84 OCA].
+
<StructureSection load='2p84' size='340' side='right'caption='[[2p84]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
[[Category: Single protein]]
+
== Structural highlights ==
-
[[Category: Staphylococcus phage 187]]
+
<table><tr><td colspan='2'>[[2p84]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_virus_37 Staphylococcus virus 37]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P84 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P84 FirstGlance]. <br>
-
[[Category: Adams, J.M.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
[[Category: Almo, S.C.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p84 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p84 OCA], [https://pdbe.org/2p84 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p84 RCSB], [https://www.ebi.ac.uk/pdbsum/2p84 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p84 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p84 TOPSAN]</span></td></tr>
-
[[Category: Bain, K.T.]]
+
</table>
-
[[Category: Burley, S.K.]]
+
== Function ==
-
[[Category: Emtage, S.]]
+
[https://www.uniprot.org/uniprot/Q4ZC86_9CAUD Q4ZC86_9CAUD]
-
[[Category: Gheyi, S.R.]]
+
== Evolutionary Conservation ==
-
[[Category: Gilmore, J.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Lau, C.]]
+
Check<jmol>
-
[[Category: Malashkevich, V.N.]]
+
<jmolCheckbox>
-
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p8/2p84_consurf.spt"</scriptWhenChecked>
-
[[Category: Reyes, C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Rooney, I.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Sauder, J.M.]]
+
</jmolCheckbox>
-
[[Category: Schwinn, K.D.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p84 ConSurf].
-
[[Category: Thompson, D.A.]]
+
<div style="clear:both"></div>
-
[[Category: Toro, R.]]
+
__TOC__
-
[[Category: Wasserman, T.]]
+
</StructureSection>
-
[[Category: hypothetical protein]]
+
[[Category: Large Structures]]
-
[[Category: new york structural genomics research consortium]]
+
[[Category: Staphylococcus virus 37]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Adams JM]]
-
[[Category: nysgrc]]
+
[[Category: Almo SC]]
-
[[Category: nysgxrc]]
+
[[Category: Bain KT]]
-
[[Category: protein structure initiative]]
+
[[Category: Burley SK]]
-
[[Category: psi]]
+
[[Category: Emtage S]]
-
[[Category: structural genomics]]
+
[[Category: Gheyi SR]]
-
 
+
[[Category: Gilmore J]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:21:17 2008''
+
[[Category: Lau C]]
 +
[[Category: Malashkevich VN]]
 +
[[Category: Reyes C]]
 +
[[Category: Rooney I]]
 +
[[Category: Sauder JM]]
 +
[[Category: Schwinn KD]]
 +
[[Category: Thompson DA]]
 +
[[Category: Toro R]]
 +
[[Category: Wasserman T]]

Current revision

Crystal structure of ORF041 from Bacteriophage 37

PDB ID 2p84

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools