3qr2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:07, 17 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3qr2.png|left|200px]]
 
-
<!--
+
==Wild type CD147 Ig0 domain==
-
The line below this paragraph, containing "STRUCTURE_3qr2", creates the "Structure Box" on the page.
+
<StructureSection load='3qr2' size='340' side='right'caption='[[3qr2]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3qr2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QR2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QR2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qr2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qr2 OCA], [https://pdbe.org/3qr2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qr2 RCSB], [https://www.ebi.ac.uk/pdbsum/3qr2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qr2 ProSAT]</span></td></tr>
-
{{STRUCTURE_3qr2| PDB=3qr2 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BASI_HUMAN BASI_HUMAN] Plays an important role in targeting the monocarboxylate transporters SLC16A1, SLC16A3 and SLC16A8 to the plasma membrane. Plays pivotal roles in spermatogenesis, embryo implantation, neural network formation and tumor progression. Stimulates adjacent fibroblasts to produce matrix metalloproteinases (MMPS). Seems to be a receptor for oligomannosidic glycans. In vitro, promotes outgrowth of astrocytic processes.<ref>PMID:17127621</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
CD147 is a type I transmembrane protein that is involved in inflammatory diseases, cancer progression, and multiple human pathogens utilize CD147 for efficient infection. CD147 expression is so high in several cancers that it is now used as a prognostic marker. The two primary isoforms of CD147 that are related to cancer progression have been identified, differing in their number of immunoglobulin (Ig)-like domains. These include CD147 Ig1-Ig2, which is ubiquitously expressed in most tissues, and CD147 Ig0-Ig1-Ig2, which is retinal specific and implicated in retinoblastoma. However, little is known in regard to the retinal specific CD147 Ig0 domain despite its potential role in retinoblastoma. We present the first crystal structure of the human CD147 Ig0 domain and show that the CD147 Ig0 domain is a crystallographic dimer with an I-type domain structure, which maintained in solution. Furthermore, we have utilized our structural data together with mutagenesis to probe the biological activity of CD147-containing proteins, both with and without the CD147 Ig0 domain, within several model cell lines. Our findings reveal that the CD147 Ig0 domain is a potent stimulator of interleukin-6 and suggest that the CD147 Ig0 domain has its own receptor distinct from that of the other CD147 Ig-like domains, CD147 Ig1-Ig2. Finally, we show that the CD147 Ig0 dimer is the functional unit required for activity and can be disrupted by a single point mutation.
-
===Wild type CD147 Ig0 domain===
+
The Retinal Specific CD147 Ig0 Domain: From Molecular Structure to Biological Activity.,Redzic JS, Armstrong GS, Isern NG, Jones DN, Kieft JS, Eisenmesser EZ J Mol Biol. 2011 Aug 5;411(1):68-82. Epub 2011 May 19. PMID:21620857<ref>PMID:21620857</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_21620857}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 3qr2" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 21620857 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_21620857}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
[[3qr2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QR2 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:021620857</ref><references group="xtra"/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Armstrong, G S.]]
+
[[Category: Large Structures]]
-
[[Category: BSGC, Berkeley Structural Genomics Center.]]
+
[[Category: Armstrong GS]]
-
[[Category: Eisenmesser, E Z.]]
+
[[Category: Eisenmesser EZ]]
-
[[Category: Isern, N G.]]
+
[[Category: Isern NG]]
-
[[Category: Kieft, J S.]]
+
[[Category: Kieft JS]]
-
[[Category: Redzic, J S.]]
+
[[Category: Redzic JS]]
-
[[Category: Berkeley structural genomics center]]
+
-
[[Category: Beta sheet]]
+
-
[[Category: Bsgc]]
+
-
[[Category: Cd147]]
+
-
[[Category: Cell adhesion]]
+
-
[[Category: Emmprin]]
+
-
[[Category: Immunoglobulin-like domain]]
+
-
[[Category: Structural genomic]]
+

Current revision

Wild type CD147 Ig0 domain

PDB ID 3qr2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3qr2"
Personal tools