2vjh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2vjh" [edit=sysop:move=sysop])
Current revision (15:21, 13 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2vjh.png|left|200px]]
 
-
<!--
+
==The structure of Phycoerythrin from Gloeobacter violaceus==
-
The line below this paragraph, containing "STRUCTURE_2vjh", creates the "Structure Box" on the page.
+
<StructureSection load='2vjh' size='340' side='right'caption='[[2vjh]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2vjh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VJH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VJH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene>, <scene name='pdbligand=PEB:PHYCOERYTHROBILIN'>PEB</scene>, <scene name='pdbligand=PUB:PHYCOUROBILIN'>PUB</scene></td></tr>
-
{{STRUCTURE_2vjh| PDB=2vjh | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vjh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vjh OCA], [https://pdbe.org/2vjh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vjh RCSB], [https://www.ebi.ac.uk/pdbsum/2vjh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vjh ProSAT]</span></td></tr>
-
 
+
</table>
-
===THE STRUCTURE OF PHYCOERYTHRIN FROM GLOEOBACTER VIOLACEUS===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q7NLD7_GLOVI Q7NLD7_GLOVI]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[2vjh]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VJH OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vj/2vjh_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vjh ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Gloeobacter violaceus]]
[[Category: Gloeobacter violaceus]]
-
[[Category: Barber, J.]]
+
[[Category: Large Structures]]
-
[[Category: Benson, S.]]
+
[[Category: Barber J]]
-
[[Category: Murray, J W.]]
+
[[Category: Benson S]]
-
[[Category: Nield, J.]]
+
[[Category: Murray JW]]
-
[[Category: Light-harvesting]]
+
[[Category: Nield J]]
-
[[Category: Photosynthesis]]
+

Current revision

The structure of Phycoerythrin from Gloeobacter violaceus

PDB ID 2vjh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools