This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2v43

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:07, 1 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2v43.png|left|200px]]
 
-
<!--
+
==Crystal structure of RseB: a sensor for periplasmic stress response in E. coli==
-
The line below this paragraph, containing "STRUCTURE_2v43", creates the "Structure Box" on the page.
+
<StructureSection load='2v43' size='340' side='right'caption='[[2v43]], [[Resolution|resolution]] 2.37&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2v43]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V43 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V43 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.37&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYS:CYSTEINE'>CYS</scene></td></tr>
-
{{STRUCTURE_2v43| PDB=2v43 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v43 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v43 OCA], [https://pdbe.org/2v43 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v43 RCSB], [https://www.ebi.ac.uk/pdbsum/2v43 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v43 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RSEB_ECOLI RSEB_ECOLI] Seems to modulate the activity of RpoE (sigma-E).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v4/2v43_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v43 ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF RSEB: A SENSOR FOR PERIPLASMIC STRESS RESPONSE IN E. COLI===
+
==See Also==
-
 
+
*[[Response regulator 3D structure|Response regulator 3D structure]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_17692869}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 17692869 is the PubMed ID number.
+
[[Category: Wollmann P]]
-
-->
+
[[Category: Zeth K]]
-
{{ABSTRACT_PUBMED_17692869}}
+
-
 
+
-
==About this Structure==
+
-
[[2v43]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V43 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:017692869</ref><references group="xtra"/>
+
-
[[Category: Escherichia coli]]
+
-
[[Category: Wollmann, P.]]
+
-
[[Category: Zeth, K.]]
+
-
[[Category: Lipoprotein binding]]
+
-
[[Category: Regulator]]
+
-
[[Category: Regulatory protein]]
+
-
[[Category: Sensor for periplasmic stress]]
+

Current revision

Crystal structure of RseB: a sensor for periplasmic stress response in E. coli

PDB ID 2v43

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools