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3eoz

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[[Image:3eoz.png|left|200px]]
 
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==Crystal Structure of Phosphoglycerate Mutase from Plasmodium Falciparum, PFD0660w==
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The line below this paragraph, containing "STRUCTURE_3eoz", creates the "Structure Box" on the page.
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<StructureSection load='3eoz' size='340' side='right'caption='[[3eoz]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3eoz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plaf7 Plaf7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EOZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EOZ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3eoz| PDB=3eoz | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PFD0660w ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 PLAF7])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphoglycerate_mutase Phosphoglycerate mutase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.1 5.4.2.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eoz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eoz OCA], [https://pdbe.org/3eoz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eoz RCSB], [https://www.ebi.ac.uk/pdbsum/3eoz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eoz ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/3eoz_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eoz ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Plasmodium falciparum malaria is the most important parasitic disease worldwide, responsible for an estimated 1 million deaths annually. Two P. falciparum genes code for putative phosphoglycerate mutases (PGMases), a widespread protein group characterized by the involvement of histidine residues in their catalytic mechanism. PGMases are responsible for the interconversion between 2 and 3-phosphoglycerate, an intermediate step in the glycolysis pathway. We have determined the crystal structures of one of the P. falciparum's PGMases (PfPGM2) and a functionally distinct phosphoglycerate mutase from Cryptosporidium parvum, a related apicomplexan parasite. We performed sequence and structural comparisons between the two structures, another P. falciparum enzyme (PfPGM1) and several other PGM family members from other organisms. The comparisons revealed a distinct conformation of the catalytically active residues not seen in previously determined phosphoglycerate mutase structures. Furthermore, characterization of their enzymatic activities revealed contrasting behaviors between the PfPGM2 and the classical cofactor-dependent PGMase from C. parvum, clearly establishing PfPGM2 as a phosphatase with a residual level of mutase activity. Further support for this function attribution was provided by our structural comparison with previously characterized PGM family members. Genetic characterization of PGM2 in the rodent parasite Plasmodium berghei indicated that the protein might be essential to blood stage asexual growth, and a GFP tagged allele is expressed in both blood and zygote ookinete development and located in the cytoplasm. The P. falciparum PGM2 is either an enzyme implicated in the phosphate metabolism of the parasite or a regulator of its life cycle.
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===Crystal Structure of Phosphoglycerate Mutase from Plasmodium Falciparum, PFD0660w===
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Characterization of a new phosphatase from Plasmodium.,Hills T, Srivastava A, Ayi K, Wernimont AK, Kain K, Waters AP, Hui R, Pizarro JC Mol Biochem Parasitol. 2011 Oct;179(2):69-79. Epub 2011 Jun 13. PMID:21689687<ref>PMID:21689687</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_21689687}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3eoz" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 21689687 is the PubMed ID number.
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== References ==
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-->
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<references/>
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{{ABSTRACT_PUBMED_21689687}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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[[3eoz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EOZ OCA].
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==Reference==
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<ref group="xtra">PMID:021689687</ref><references group="xtra"/>
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[[Category: Phosphoglycerate mutase]]
[[Category: Phosphoglycerate mutase]]
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[[Category: Plasmodium falciparum]]
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[[Category: Plaf7]]
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[[Category: Arrowsmith, C H.]]
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[[Category: Arrowsmith, C H]]
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[[Category: Bochkarev, A.]]
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[[Category: Bochkarev, A]]
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[[Category: Cossar, D.]]
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[[Category: Cossar, D]]
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[[Category: Edwards, A M.]]
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[[Category: Edwards, A M]]
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[[Category: Hills, T.]]
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[[Category: Hills, T]]
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[[Category: Hui, R.]]
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[[Category: Hui, R]]
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[[Category: Kozieradzki, I.]]
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[[Category: Kozieradzki, I]]
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[[Category: Lam, A.]]
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[[Category: Lam, A]]
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[[Category: Lew, J.]]
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[[Category: Lew, J]]
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[[Category: Lin, Y H.]]
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[[Category: Lin, Y H]]
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[[Category: Pizarro, J.]]
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[[Category: Pizarro, J]]
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[[Category: SGC, Structural Genomics Consortium.]]
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[[Category: Structural genomic]]
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[[Category: Schapira, M.]]
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[[Category: Schapira, M]]
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[[Category: Tempel, W.]]
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[[Category: Tempel, W]]
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[[Category: Vedadi, M.]]
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[[Category: Vedadi, M]]
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[[Category: Wasney, G.]]
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[[Category: Wasney, G]]
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[[Category: Weigelt, J.]]
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[[Category: Weigelt, J]]
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[[Category: Wernimont, A K.]]
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[[Category: Wernimont, A K]]
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[[Category: Zhao, Y.]]
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[[Category: Zhao, Y]]
[[Category: Isomerase]]
[[Category: Isomerase]]
[[Category: Malaria]]
[[Category: Malaria]]
[[Category: Pgam]]
[[Category: Pgam]]
[[Category: Sgc]]
[[Category: Sgc]]
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[[Category: Structural genomic]]
 
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[[Category: Structural genomics consortium]]
 

Current revision

Crystal Structure of Phosphoglycerate Mutase from Plasmodium Falciparum, PFD0660w

PDB ID 3eoz

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