2vre

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:29, 13 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2vre.png|left|200px]]
 
-
<!--
+
==crystal structure of human peroxisomal delta3,5,delta2,4-dienoyl coa isomerase==
-
The line below this paragraph, containing "STRUCTURE_2vre", creates the "Structure Box" on the page.
+
<StructureSection load='2vre' size='340' side='right'caption='[[2vre]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2vre]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VRE FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
{{STRUCTURE_2vre| PDB=2vre | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vre FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vre OCA], [https://pdbe.org/2vre PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vre RCSB], [https://www.ebi.ac.uk/pdbsum/2vre PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vre ProSAT]</span></td></tr>
-
 
+
</table>
-
===CRYSTAL STRUCTURE OF HUMAN PEROXISOMAL DELTA3,5, DELTA2,4-DIENOYL COA ISOMERASE===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/ECH1_HUMAN ECH1_HUMAN] Isomerization of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA.[UniProtKB:Q62651]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[2vre]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRE OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vr/2vre_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vre ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C.]]
+
[[Category: Large Structures]]
-
[[Category: Bountra, C.]]
+
[[Category: Arrowsmith C]]
-
[[Category: Delft, F Von.]]
+
[[Category: Bountra C]]
-
[[Category: Edwards, A.]]
+
[[Category: Edwards A]]
-
[[Category: Guo, K.]]
+
[[Category: Guo K]]
-
[[Category: Kochan, G.]]
+
[[Category: Kochan G]]
-
[[Category: Murray, J.]]
+
[[Category: Murray J]]
-
[[Category: Oppermann, U.]]
+
[[Category: Oppermann U]]
-
[[Category: Pilka, E.]]
+
[[Category: Pilka E]]
-
[[Category: Roos, A.]]
+
[[Category: Roos A]]
-
[[Category: Wikstrom, M.]]
+
[[Category: Wikstrom M]]
-
[[Category: Yue, W.]]
+
[[Category: Yue W]]
-
[[Category: 4-dienoyl-coa isomerase]]
+
[[Category: Von Delft F]]
-
[[Category: 5-delta2]]
+
-
[[Category: Delta3]]
+
-
[[Category: Fatty acid metabolism]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Lipid metabolism]]
+
-
[[Category: Mitochondrion]]
+
-
[[Category: Peroxisome]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Transit peptide]]
+

Current revision

crystal structure of human peroxisomal delta3,5,delta2,4-dienoyl coa isomerase

PDB ID 2vre

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools