2wul
From Proteopedia
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- | [[Image:2wul.png|left|200px]] | ||
- | < | + | ==CRYSTAL STRUCTURE OF THE HUMAN GLUTAREDOXIN 5 WITH BOUND GLUTATHIONE IN AN FES CLUSTER== |
- | + | <StructureSection load='2wul' size='340' side='right'caption='[[2wul]], [[Resolution|resolution]] 2.40Å' scene=''> | |
- | You may | + | == Structural highlights == |
- | + | <table><tr><td colspan='2'>[[2wul]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2wem 2wem]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WUL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WUL FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> | |
- | - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wul FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wul OCA], [https://pdbe.org/2wul PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wul RCSB], [https://www.ebi.ac.uk/pdbsum/2wul PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wul ProSAT]</span></td></tr> | |
+ | </table> | ||
+ | == Disease == | ||
+ | [https://www.uniprot.org/uniprot/GLRX5_HUMAN GLRX5_HUMAN] Adult-onset autosomal recessive sideroblastic anemia. The disease is caused by mutations affecting the gene represented in this entry. | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/GLRX5_HUMAN GLRX5_HUMAN] Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters. Required for normal iron homeostasis. Required for normal regulation of hemoglobin synthesis by the iron-sulfur protein ACO1. | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wu/2wul_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wul ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Human glutaredoxin 5 (GLRX5) is an evolutionarily conserved thiol-disulfide oxidoreductase that has a direct role in the maintenance of normal cytosolic and mitochondrial iron homeostasis and its expression affects haem biosynthesis and erythropoiesis. We have crystallised the human GLRX5 bound to two [2Fe2S] clusters and four glutathione (GSH) molecules. The crystal structure revealed a tetrameric organisation with the [2Fe2S] clusters buried in the interior and shielded from the solvent by the conserved beta1-alpha2 loop, Phe69 and the GSH molecules. Each [2Fe2S] cluster is ligated by the N-terminal active site cysteine (Cys67) thiols contributed by two protomers and two cysteine thiols from two GSH. The two subunits coordinating the cluster are in a more extended conformation compared to FeS-bound human GLRX2 and the intersubunit interactions are more extensive and involve conserved residues among monothiol GLRXs. Gelfiltration chromatography and analytical ultracentrifugation supported a tetrameric organisation of holo GLRX5 while the apo protein is monomeric. Mass spectrometry analyses revealed glutathionylation of the cysteines in the absence of the [2Fe2S] cluster, which would protect them from further oxidation and possibly facilitate cluster transfer/acceptance. Apo GLRX5 reduced glutathione mixed disulfides with a rate 100 times slower than GLRX2 and was active as a glutathione-dependent electron donor for mammalian ribonucleotide reductase. | ||
- | + | The Crystal structure of human GLRX5: iron sulphur cluster coordination, tetrameric assembly and monomer activity.,Johansson C, Roos AK, Montano SJ, Sengupta R, Filippakopoulos P, Guo K, von Delft F, Holmgren A, Oppermann U, Kavanagh KL Biochem J. 2010 Oct 29. PMID:21029046<ref>PMID:21029046</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | <div class="pdbe-citations 2wul" style="background-color:#fffaf0;"></div> | |
- | + | == References == | |
- | + | <references/> | |
- | + | __TOC__ | |
- | + | </StructureSection> | |
- | == | + | |
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- | == | + | |
- | < | + | |
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Arrowsmith CH]] |
- | [[Category: | + | [[Category: Bountra C]] |
- | [[Category: | + | [[Category: Chaikuad A]] |
- | [[Category: | + | [[Category: Cooper CDO]] |
- | [[Category: Edwards | + | [[Category: Edwards A]] |
- | [[Category: Guo | + | [[Category: Guo K]] |
- | [[Category: Johansson | + | [[Category: Johansson C]] |
- | [[Category: Kavanagh | + | [[Category: Kavanagh KL]] |
- | [[Category: Oppermann | + | [[Category: Oppermann U]] |
- | [[Category: Pike | + | [[Category: Pike ACW]] |
- | [[Category: Pilka | + | [[Category: Pilka ES]] |
- | [[Category: Roos | + | [[Category: Roos AK]] |
- | [[Category: Weigelt | + | [[Category: Weigelt J]] |
- | [[Category: Yue | + | [[Category: Yue WW]] |
- | [[Category: | + | [[Category: Von Delft F]] |
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Current revision
CRYSTAL STRUCTURE OF THE HUMAN GLUTAREDOXIN 5 WITH BOUND GLUTATHIONE IN AN FES CLUSTER
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Categories: Homo sapiens | Large Structures | Arrowsmith CH | Bountra C | Chaikuad A | Cooper CDO | Edwards A | Guo K | Johansson C | Kavanagh KL | Oppermann U | Pike ACW | Pilka ES | Roos AK | Weigelt J | Yue WW | Von Delft F