5gcn

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(New page: 200px<br /><applet load="5gcn" size="350" color="white" frame="true" align="right" spinBox="true" caption="5gcn" /> '''CATALYTIC DOMAIN OF TETRAHYMENA GCN5 HISTONE...)
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[[Image:5gcn.gif|left|200px]]<br /><applet load="5gcn" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="5gcn" />
 
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'''CATALYTIC DOMAIN OF TETRAHYMENA GCN5 HISTONE ACETYLTRANSFERASE IN COMPLEX WITH COENZYME A'''<br />
 
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==Overview==
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==CATALYTIC DOMAIN OF TETRAHYMENA GCN5 HISTONE ACETYLTRANSFERASE IN COMPLEX WITH COENZYME A==
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Gene transcription requires the release of inactive DNA from its packaging, of histone proteins. Following the discovery of the first, transcription-associated histone acetyltransferase, tetrahymena GCN5, it, was shown that yeast GCN5 is recruited to the promoter and causes, hyper-acetylation of histones and transcriptional activation of target, genes, establishing a direct connection between histone acetylation and, transcriptional activation. Many other important transcription regulators, have been found to have histone acetyltransferase activity, including, TAFII230/250, p300/CBP and its associated factor PCAF. Here we present the, solution structure of the catalytic domain of tGCN5 (residues 47-210) in, complex with coenzyme A. The structure contains two domains; the, amino-terminal domain is similar to those of other GCN5-related, N-acetyltransferases but the carboxy-terminal domain is not. Coenzyme A, binds in a deep hydrophobic pocket between the two domains. Chemical shift, changes upon titration with histone H3 peptides indicate a binding site at, the domain boundary opposite to the coenzyme A site. The structural data, indicate a single-step acetyl-transfer reaction mechanism catalysed by a, hydrogen bond to the backbone amide group of leucine 126 and the, side-chain carboxyl group of a conserved acidic residue.
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<StructureSection load='5gcn' size='340' side='right'caption='[[5gcn]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5gcn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Tetrahymena_thermophila Tetrahymena thermophila]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GCN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GCN FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gcn OCA], [https://pdbe.org/5gcn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gcn RCSB], [https://www.ebi.ac.uk/pdbsum/5gcn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gcn ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q27198_TETTH Q27198_TETTH]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gc/5gcn_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=5gcn ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Gene transcription requires the release of inactive DNA from its packaging of histone proteins. Following the discovery of the first transcription-associated histone acetyltransferase, tetrahymena GCN5, it was shown that yeast GCN5 is recruited to the promoter and causes hyper-acetylation of histones and transcriptional activation of target genes, establishing a direct connection between histone acetylation and transcriptional activation. Many other important transcription regulators have been found to have histone acetyltransferase activity, including TAFII230/250, p300/CBP and its associated factor PCAF. Here we present the solution structure of the catalytic domain of tGCN5 (residues 47-210) in complex with coenzyme A. The structure contains two domains; the amino-terminal domain is similar to those of other GCN5-related N-acetyltransferases but the carboxy-terminal domain is not. Coenzyme A binds in a deep hydrophobic pocket between the two domains. Chemical shift changes upon titration with histone H3 peptides indicate a binding site at the domain boundary opposite to the coenzyme A site. The structural data indicate a single-step acetyl-transfer reaction mechanism catalysed by a hydrogen bond to the backbone amide group of leucine 126 and the side-chain carboxyl group of a conserved acidic residue.
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==About this Structure==
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Solution structure of the catalytic domain of GCN5 histone acetyltransferase bound to coenzyme A.,Lin Y, Fletcher CM, Zhou J, Allis CD, Wagner G Nature. 1999 Jul 1;400(6739):86-9. PMID:10403255<ref>PMID:10403255</ref>
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5GCN is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Tetrahymena_thermophila Tetrahymena thermophila] with <scene name='pdbligand=COA:'>COA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GCN OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Solution structure of the catalytic domain of GCN5 histone acetyltransferase bound to coenzyme A., Lin Y, Fletcher CM, Zhou J, Allis CD, Wagner G, Nature. 1999 Jul 1;400(6739):86-9. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=10403255 10403255]
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</div>
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[[Category: Single protein]]
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<div class="pdbe-citations 5gcn" style="background-color:#fffaf0;"></div>
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[[Category: Tetrahymena thermophila]]
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[[Category: Allis, C.D.]]
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[[Category: Fletcher, C.M.]]
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[[Category: Lin, Y.]]
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[[Category: Wagner, G.]]
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[[Category: Zhou, J.]]
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[[Category: COA]]
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[[Category: chromatin remodeling]]
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[[Category: histone acetyltransferase]]
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[[Category: transcription regulation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:48:26 2008''
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==See Also==
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*[[Histone acetyltransferase 3D structures|Histone acetyltransferase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Tetrahymena thermophila]]
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[[Category: Allis CD]]
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[[Category: Fletcher CM]]
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[[Category: Lin Y]]
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[[Category: Wagner G]]
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[[Category: Zhou J]]

Current revision

CATALYTIC DOMAIN OF TETRAHYMENA GCN5 HISTONE ACETYLTRANSFERASE IN COMPLEX WITH COENZYME A

PDB ID 5gcn

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