3ixh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3ixh" [edit=sysop:move=sysop])
Current revision (10:07, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ixh.png|left|200px]]
 
-
<!--
+
==X-ray crystal structure of the extended-spectrum AmpC Y221G mutant beta-lactamase in complex with cefotaxime at 2.3 Angstrom resolution==
-
The line below this paragraph, containing "STRUCTURE_3ixh", creates the "Structure Box" on the page.
+
<StructureSection load='3ixh' size='340' side='right'caption='[[3ixh]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ixh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IXH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IXH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CEF:CEFOTAXIME,+C3+CLEAVED,+OPEN,+BOUND+FORM'>CEF</scene></td></tr>
-
{{STRUCTURE_3ixh| PDB=3ixh | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ixh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ixh OCA], [https://pdbe.org/3ixh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ixh RCSB], [https://www.ebi.ac.uk/pdbsum/3ixh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ixh ProSAT]</span></td></tr>
-
 
+
</table>
-
===X-ray crystal structure of the extended-spectrum AmpC Y221G mutant beta-lactamase in complex with cefotaxime at 2.3 Angstrom resolution===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/AMPC_ECOLI AMPC_ECOLI] This protein is a serine beta-lactamase with a substrate specificity for cephalosporins.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_19913034}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19913034 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/3ixh_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_19913034}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[3ixh]] is a 2 chain structure of [[Beta-lactamase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IXH OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ixh ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Beta-lactamase]]
+
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:019913034</ref><references group="xtra"/>
+
[[Category: Escherichia coli K-12]]
-
[[Category: Beta-lactamase]]
+
[[Category: Large Structures]]
-
[[Category: Escherichia coli]]
+
[[Category: Shoichet BK]]
-
[[Category: Shoichet, B K.]]
+
[[Category: Thomas VL]]
-
[[Category: Thomas, V L.]]
+
-
[[Category: Antibiotic resistance]]
+
-
[[Category: Beta-lactamase]]
+
-
[[Category: Cephalosporinase]]
+
-
[[Category: Extended-spectrum antibiotic resistance]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Serine hydrolase]]
+

Current revision

X-ray crystal structure of the extended-spectrum AmpC Y221G mutant beta-lactamase in complex with cefotaxime at 2.3 Angstrom resolution

PDB ID 3ixh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools