3pdk

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[[Image:3pdk.jpg|left|200px]]
 
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==crystal structure of phosphoglucosamine mutase from B. anthracis==
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The line below this paragraph, containing "STRUCTURE_3pdk", creates the "Structure Box" on the page.
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<StructureSection load='3pdk' size='340' side='right'caption='[[3pdk]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3pdk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PDK FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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{{STRUCTURE_3pdk| PDB=3pdk | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pdk OCA], [https://pdbe.org/3pdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pdk RCSB], [https://www.ebi.ac.uk/pdbsum/3pdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pdk ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GLMM_BACAN GLMM_BACAN] Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.[HAMAP-Rule:MF_01554]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Phosphoglucosamine mutase (PNGM) is an evolutionarily conserved bacterial enzyme that participates in the cytoplasmic steps of peptidoglycan biosynthesis. As peptidoglycan is essential for bacterial survival and is absent in humans, enzymes in this pathway have been the focus of intensive inhibitor design efforts. Many aspects of the structural biology of the peptidoglycan pathway have been elucidated, with the exception of the PNGM structure. We present here the crystal structure of PNGM from the human pathogen and bioterrorism agent Bacillus anthracis. The structure reveals key residues in the large active site cleft of the enzyme which likely have roles in catalysis and specificity. A large conformational change of the C-terminal domain of PNGM is observed when comparing two independent molecules in the crystal, shedding light on both the apo- and ligand-bound conformers of the enzyme. Crystal packing analyses and dynamic light scattering studies suggest that the enzyme is a dimer in solution. Multiple sequence alignments show that residues in the dimer interface are conserved, suggesting that many PNGM enzymes adopt this oligomeric state. This work lays the foundation for the development of inhibitors for PNGM enzymes from human pathogens.
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===crystal structure of phosphoglucosamine mutase from B. anthracis===
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Crystal Structure of Bacillus anthracis Phosphoglucosamine Mutase, an Enzyme in the Peptidoglycan Biosynthetic Pathway.,Mehra-Chaudhary R, Mick J, Beamer LJ J Bacteriol. 2011 Aug;193(16):4081-7. Epub 2011 Jun 17. PMID:21685296<ref>PMID:21685296</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3pdk" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 21685296 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_21685296}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[3pdk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PDK OCA].
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==Reference==
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<ref group="xtra">PMID:021685296</ref><ref group="xtra">PMID:019574653</ref><references group="xtra"/>
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[[Category: Bacillus anthracis]]
[[Category: Bacillus anthracis]]
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[[Category: Phosphoglucosamine mutase]]
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[[Category: Large Structures]]
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[[Category: Beamer, L J.]]
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[[Category: Beamer LJ]]
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[[Category: Henzl, M.]]
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[[Category: Henzl M]]
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[[Category: Mehra-Chaudhary, R.]]
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[[Category: Mehra-Chaudhary R]]
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[[Category: Mick, J.]]
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[[Category: Mick J]]
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[[Category: Tanner, J J.]]
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[[Category: Tanner JJ]]
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[[Category: 4-domain architecture]]
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[[Category: Isomerase]]
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[[Category: Mixed a/b fold]]
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[[Category: Phosphohexomutase]]
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Current revision

crystal structure of phosphoglucosamine mutase from B. anthracis

PDB ID 3pdk

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