This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2yc3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:49, 20 December 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2yc3.jpg|left|200px]]
 
-
<!--
+
==Inhibitors of the herbicidal target IspD==
-
The line below this paragraph, containing "STRUCTURE_2yc3", creates the "Structure Box" on the page.
+
<StructureSection load='2yc3' size='340' side='right'caption='[[2yc3]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2yc3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YC3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YC3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=MW5:6-BENZYL-5-CHLORO[1,2,4]TRIAZOLO[1,5-A]PYRIMIDIN-7(3H)-ONE'>MW5</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
{{STRUCTURE_2yc3| PDB=2yc3 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yc3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yc3 OCA], [https://pdbe.org/2yc3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yc3 RCSB], [https://www.ebi.ac.uk/pdbsum/2yc3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yc3 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ISPD_ARATH ISPD_ARATH] Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Is essential for chloroplast development and required for pigments and gibberellins biosynthesis.<ref>PMID:10841550</ref> <ref>PMID:12029484</ref> <ref>PMID:18236010</ref>
-
===INHIBITORS OF THE HERBICIDAL TARGET ISPD===
+
==See Also==
-
 
+
*[[MEP cytidylyltransferase 3D structures|MEP cytidylyltransferase 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
[[2yc3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YC3 OCA].
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
-
<ref group="xtra">PMID:021766403</ref><ref group="xtra">PMID:016478479</ref><references group="xtra"/>
+
-
[[Category: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase]]
+
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
-
[[Category: Hoeffken, H W.]]
+
[[Category: Large Structures]]
-
[[Category: Allosteric pocket]]
+
[[Category: Hoeffken HW]]
-
[[Category: Herbicide]]
+
-
[[Category: Non-mevalonate-pathway]]
+
-
[[Category: Transferase]]
+

Current revision

Inhibitors of the herbicidal target IspD

PDB ID 2yc3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools