This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3tdf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:31, 1 November 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3tdf.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3tdf", creates the "Structure Box" on the page.
+
<StructureSection load='3tdf' size='340' side='right'caption='[[3tdf]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3tdf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii_ATCC_19606_=_CIP_70.34_=_JCM_6841 Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TDF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TDF FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2KT:2-KETOBUTYRIC+ACID'>2KT</scene></td></tr>
-
{{STRUCTURE_3tdf| PDB=3tdf | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tdf OCA], [https://pdbe.org/3tdf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tdf RCSB], [https://www.ebi.ac.uk/pdbsum/3tdf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tdf ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D0CFC3_ACIB2 D0CFC3_ACIB2] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[ARBA:ARBA00003294][HAMAP-Rule:MF_00418]
-
===Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution===
+
==See Also==
-
 
+
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[3tdf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_baumannii Acinetobacter baumannii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TDF OCA].
+
[[Category: Acinetobacter baumannii ATCC 19606 = CIP 70 34 = JCM 6841]]
-
[[Category: Acinetobacter baumannii]]
+
[[Category: Large Structures]]
-
[[Category: Dihydrodipicolinate synthase]]
+
[[Category: Kaur P]]
-
[[Category: Kaur, P.]]
+
[[Category: Kaushik S]]
-
[[Category: Kaushik, S.]]
+
[[Category: Kumar M]]
-
[[Category: Kumar, M.]]
+
[[Category: Sharma S]]
-
[[Category: Sharma, S.]]
+
[[Category: Singh TP]]
-
[[Category: Singh, T P.]]
+
[[Category: Sinha M]]
-
[[Category: Sinha, M.]]
+
[[Category: Tewari R]]
-
[[Category: Tewari, R.]]
+
-
[[Category: 2-ketobutanoic acid]]
+
-
[[Category: Dhdp]]
+
-
[[Category: Lyase]]
+
-
[[Category: Lysine biosynthesis]]
+
-
[[Category: Tim barrel]]
+

Current revision

Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution

PDB ID 3tdf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools