This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1gqo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1gqo" [edit=sysop:move=sysop])
Current revision (11:23, 27 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1gqo.png|left|200px]]
 
-
<!--
+
==Type II Dehydroquinase from Bacillus subtilis==
-
The line below this paragraph, containing "STRUCTURE_1gqo", creates the "Structure Box" on the page.
+
<StructureSection load='1gqo' size='340' side='right'caption='[[1gqo]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1gqo]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GQO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GQO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
{{STRUCTURE_1gqo| PDB=1gqo | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gqo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gqo OCA], [https://pdbe.org/1gqo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gqo RCSB], [https://www.ebi.ac.uk/pdbsum/1gqo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gqo ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AROQ_BACSU AROQ_BACSU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/1gqo_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gqo ConSurf].
 +
<div style="clear:both"></div>
-
===TYPE II DEHYDROQUINASE FROM BACILLUS SUBTILIS===
+
==See Also==
-
 
+
*[[Dehydroquinase 3D structures|Dehydroquinase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10360352}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 10360352 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_10360352}}
+
-
 
+
-
==About this Structure==
+
-
[[1gqo]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GQO OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:010360352</ref><references group="xtra"/>
+
-
[[Category: 3-dehydroquinate dehydratase]]
+
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Coggins, J R.]]
+
[[Category: Large Structures]]
-
[[Category: Lapthorn, A J.]]
+
[[Category: Coggins JR]]
-
[[Category: Robinson, D A.]]
+
[[Category: Lapthorn AJ]]
-
[[Category: Roszak, A W.]]
+
[[Category: Robinson DA]]
-
[[Category: Dehydratase]]
+
[[Category: Roszak AW]]
-
[[Category: Lyase]]
+

Current revision

Type II Dehydroquinase from Bacillus subtilis

PDB ID 1gqo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1gqo"
Personal tools