3r1h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:06, 14 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3r1h.png|left|200px]]
 
-
<!--
+
==Crystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Ca2+ bound==
-
The line below this paragraph, containing "STRUCTURE_3r1h", creates the "Structure Box" on the page.
+
<StructureSection load='3r1h' size='340' side='right'caption='[[3r1h]], [[Resolution|resolution]] 3.15&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3r1h]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R1H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R1H FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.15&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A23:ADENOSINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>A23</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
-
{{STRUCTURE_3r1h| PDB=3r1h | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r1h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r1h OCA], [https://pdbe.org/3r1h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r1h RCSB], [https://www.ebi.ac.uk/pdbsum/3r1h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r1h ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SNRPA_HUMAN SNRPA_HUMAN] Binds stem loop II of U1 snRNA. It is the first snRNP to interact with pre-mRNA. This interaction is required for the subsequent binding of U2 snRNP and the U4/U6/U5 tri-snRNP. In a snRNP-free form (SF-A) may be involved in coupled pre-mRNA splicing and polyadenylation process. Binds preferentially to the 5'-UGCAC-3' motif in vitro.<ref>PMID:9848648</ref>
-
===Crystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Ca2+ bound===
+
==See Also==
-
 
+
*[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]]
-
 
+
*[[Ribozyme 3D structures|Ribozyme 3D structures]]
-
<!--
+
== References ==
-
The line below this paragraph, {{ABSTRACT_PUBMED_21857665}}, adds the Publication Abstract to the page
+
<references/>
-
(as it appears on PubMed at http://www.pubmed.gov), where 21857665 is the PubMed ID number.
+
__TOC__
-
-->
+
</StructureSection>
-
{{ABSTRACT_PUBMED_21857665}}
+
-
 
+
-
==About this Structure==
+
-
[[3r1h]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R1H OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:021857665</ref><references group="xtra"/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Bartel, D P.]]
+
[[Category: Large Structures]]
-
[[Category: Shechner, D M.]]
+
[[Category: Bartel DP]]
-
[[Category: Catalytic rna]]
+
[[Category: Shechner DM]]
-
[[Category: Ligase ribozyme]]
+
-
[[Category: Ribozyme]]
+
-
[[Category: Rna binding protein-rna complex]]
+

Current revision

Crystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Ca2+ bound

PDB ID 3r1h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools