3aq1

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[[Image:3aq1.jpg|left|200px]]
 
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==Open state monomer of a group II chaperonin from methanococcoides burtonii==
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The line below this paragraph, containing "STRUCTURE_3aq1", creates the "Structure Box" on the page.
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<StructureSection load='3aq1' size='340' side='right'caption='[[3aq1]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3aq1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanococcoides_burtonii_DSM_6242 Methanococcoides burtonii DSM 6242]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AQ1 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.746&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aq1 OCA], [https://pdbe.org/3aq1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aq1 RCSB], [https://www.ebi.ac.uk/pdbsum/3aq1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aq1 ProSAT]</span></td></tr>
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{{STRUCTURE_3aq1| PDB=3aq1 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q12UN6_METBU Q12UN6_METBU]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Archaea are abundant in permanently cold environments. The Antarctic methanogen, Methanococcoides burtonii, has proven an excellent model for studying molecular mechanisms of cold adaptation. Methanococcoides burtonii contains three group II chaperonins that diverged prior to its closest orthologues from mesophilic Methanosarcina spp. The relative abundance of the three chaperonins shows little dependence on organism growth temperature, except at the highest temperatures, where the most thermally stable chaperonin increases in abundance. In vitro and in vivo, the M. burtonii chaperonins are predominantly monomeric, with only 23-33% oligomeric, thereby differing from other archaea where an oligomeric ring form is dominant. The crystal structure of an N-terminally truncated chaperonin reveals a monomeric protein with a fully open nucleotide binding site. When compared with closed state group II chaperonin structures, a large-scale approximately 30 degrees rotation between the equatorial and intermediate domains is observed resulting in an open nucleotide binding site. This is analogous to the transition observed between open and closed states of group I chaperonins but contrasts with recent archaeal group II chaperonin open state ring structures. The predominance of monomeric form and the ability to adopt a fully open nucleotide site appear to be unique features of the M. burtonii group II chaperonins.
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===Open state monomer of a group II chaperonin from methanococcoides burtonii===
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Chaperonins from an Antarctic archaeon are predominantly monomeric: crystal structure of an open state monomer.,Pilak O, Harrop SJ, Siddiqui KS, Chong K, De Francisci D, Burg D, Williams TJ, Cavicchioli R, Curmi PM Environ Microbiol. 2011 Apr 7. doi: 10.1111/j.1462-2920.2011.02477.x. PMID:21477108<ref>PMID:21477108</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3aq1" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_21477108}}, adds the Publication Abstract to the page
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*[[Chaperonin 3D structures|Chaperonin 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 21477108 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_21477108}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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[[3aq1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanococcoides_burtonii Methanococcoides burtonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQ1 OCA].
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[[Category: Methanococcoides burtonii DSM 6242]]
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[[Category: Burg D]]
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==Reference==
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[[Category: Cavicchioli R]]
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<ref group="xtra">PMID:021477108</ref><references group="xtra"/>
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[[Category: Curmi PM]]
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[[Category: Methanococcoides burtonii]]
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[[Category: De Francisci D]]
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[[Category: Burg, D.]]
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[[Category: Harrop SJ]]
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[[Category: Cavicchioli, R.]]
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[[Category: Pilak O]]
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[[Category: Curmi, P M.]]
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[[Category: Siddiqui KS]]
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[[Category: Francisci, D De.]]
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[[Category: Williams TJ]]
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[[Category: Harrop, S J.]]
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[[Category: Pilak, O.]]
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[[Category: Siddiqui, K S.]]
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[[Category: Williams, T J.]]
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[[Category: Chaperone]]
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[[Category: Group ii chaperonin]]
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[[Category: Protein folding]]
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Current revision

Open state monomer of a group II chaperonin from methanococcoides burtonii

PDB ID 3aq1

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