1cs1

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[[Image:1cs1.gif|left|200px]]<br /><applet load="1cs1" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="1cs1, resolution 1.5&Aring;" />
 
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'''CYSTATHIONINE GAMMA-SYNTHASE (CGS) FROM ESCHERICHIA COLI'''<br />
 
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==Overview==
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==CYSTATHIONINE GAMMA-SYNTHASE (CGS) FROM ESCHERICHIA COLI==
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The transsulfuration enzyme cystathionine gamma-synthase (CGS) catalyses, the pyridoxal 5'-phosphate (PLP)-dependent gamma-replacement of, O-succinyl-L-homoserine and L-cysteine, yielding L-cystathionine. The, crystal structure of the Escherichia coli enzyme has been solved by, molecular replacement with the known structure of cystathionine beta-lyase, (CBL), and refined at 1.5 A resolution to a crystallographic R-factor of, 20.0%. The enzyme crystallizes as an alpha4 tetramer with the subunits, related by non-crystallographic 222 symmetry. The spatial fold of the, subunits, with three functionally distinct domains and their quaternary, arrangement, is similar to that of CBL. Previously proposed reaction, mechanisms for CGS can be checked against the structural model, allowing, interpretation of the catalytic and substrate-binding functions of, individual active site residues. Enzyme-substrate models pinpoint specific, residues responsible for the substrate specificity, in agreement with, structural comparisons with CBL. Both steric and electrostatic designs of, the active site seem to achieve proper substrate selection and productive, orientation. Amino acid sequence and structural alignments of CGS and CBL, suggest that differences in the substrate-binding characteristics are, responsible for the different reaction chemistries. Because CGS catalyses, the only known PLP-dependent replacement reaction at Cgamma of certain, amino acids, the results will help in our understanding of the chemical, versatility of PLP.
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<StructureSection load='1cs1' size='340' side='right'caption='[[1cs1]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1cs1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CS1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CS1 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DHD:2,4-DIOXO-PENTANEDIOIC+ACID'>DHD</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cs1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cs1 OCA], [https://pdbe.org/1cs1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cs1 RCSB], [https://www.ebi.ac.uk/pdbsum/1cs1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cs1 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/METB_ECOLI METB_ECOLI] Catalyzes the formation of L-cystathionine from O-succinyl-L-homoserine (OSHS) and L-cysteine, via a gamma-replacement reaction. In the absence of thiol, catalyzes gamma-elimination to form 2-oxobutanoate, succinate and ammonia.<ref>PMID:2405903</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cs/1cs1_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cs1 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The transsulfuration enzyme cystathionine gamma-synthase (CGS) catalyses the pyridoxal 5'-phosphate (PLP)-dependent gamma-replacement of O-succinyl-L-homoserine and L-cysteine, yielding L-cystathionine. The crystal structure of the Escherichia coli enzyme has been solved by molecular replacement with the known structure of cystathionine beta-lyase (CBL), and refined at 1.5 A resolution to a crystallographic R-factor of 20.0%. The enzyme crystallizes as an alpha4 tetramer with the subunits related by non-crystallographic 222 symmetry. The spatial fold of the subunits, with three functionally distinct domains and their quaternary arrangement, is similar to that of CBL. Previously proposed reaction mechanisms for CGS can be checked against the structural model, allowing interpretation of the catalytic and substrate-binding functions of individual active site residues. Enzyme-substrate models pinpoint specific residues responsible for the substrate specificity, in agreement with structural comparisons with CBL. Both steric and electrostatic designs of the active site seem to achieve proper substrate selection and productive orientation. Amino acid sequence and structural alignments of CGS and CBL suggest that differences in the substrate-binding characteristics are responsible for the different reaction chemistries. Because CGS catalyses the only known PLP-dependent replacement reaction at Cgamma of certain amino acids, the results will help in our understanding of the chemical versatility of PLP.
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==About this Structure==
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Crystal structure of Escherichia coli cystathionine gamma-synthase at 1.5 A resolution.,Clausen T, Huber R, Prade L, Wahl MC, Messerschmidt A EMBO J. 1998 Dec 1;17(23):6827-38. PMID:9843488<ref>PMID:9843488</ref>
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1CS1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with <scene name='pdbligand=DHD:'>DHD</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Transferred_entry:_2.5.1.48 Transferred entry: 2.5.1.48], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.99.9 4.2.99.9] Known structural/functional Sites: <scene name='pdbsite=PLA:Cofactor+Site+Chain+A'>PLA</scene>, <scene name='pdbsite=PLB:Cofactor+Site+Chain+B'>PLB</scene>, <scene name='pdbsite=PLC:Cofactor+Site+Chain+C'>PLC</scene> and <scene name='pdbsite=PLD:Cofactor+Site+Chain+D'>PLD</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CS1 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Crystal structure of Escherichia coli cystathionine gamma-synthase at 1.5 A resolution., Clausen T, Huber R, Prade L, Wahl MC, Messerschmidt A, EMBO J. 1998 Dec 1;17(23):6827-38. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9843488 9843488]
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</div>
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[[Category: Escherichia coli]]
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<div class="pdbe-citations 1cs1" style="background-color:#fffaf0;"></div>
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[[Category: Single protein]]
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[[Category: Transferred entry: 2.5.1.48]]
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[[Category: Clausen, T.]]
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[[Category: Messerschmidt, A.]]
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[[Category: DHD]]
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[[Category: llp-dependent enzymes]]
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[[Category: lyase]]
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[[Category: methionine biosynthesis]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 09:34:53 2008''
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==See Also==
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*[[Cystathionine gamma synthase|Cystathionine gamma synthase]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Escherichia coli]]
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[[Category: Large Structures]]
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[[Category: Clausen T]]
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[[Category: Messerschmidt A]]

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CYSTATHIONINE GAMMA-SYNTHASE (CGS) FROM ESCHERICHIA COLI

PDB ID 1cs1

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