2lhf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:43, 15 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2lhf.png|left|200px]]
 
-
<!--
+
==Solution structure of outer membrane protein H (OprH) from P. aeruginosa in DHPC micelles==
-
The line below this paragraph, containing "STRUCTURE_2lhf", creates the "Structure Box" on the page.
+
<StructureSection load='2lhf' size='340' side='right'caption='[[2lhf]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2lhf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LHF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LHF FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lhf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lhf OCA], [https://pdbe.org/2lhf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lhf RCSB], [https://www.ebi.ac.uk/pdbsum/2lhf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lhf ProSAT]</span></td></tr>
-
{{STRUCTURE_2lhf| PDB=2lhf | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q51486_PSEAI Q51486_PSEAI]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Pseudomonas aeruginosa is a major nosocomial pathogen that infects cystic fibrosis and immunocompromised patients. The impermeability of the P. aeruginosa outer membrane contributes substantially to the notorious antibiotic resistance of this human pathogen. This impermeability is partially imparted by the outer membrane protein H (OprH). Here we have solved the structure of OprH in a lipid environment by solution NMR. The structure reveals an eight-stranded beta-barrel protein with four extracellular loops of unequal size. Fast time-scale dynamics measurements show that the extracellular loops are disordered and unstructured. It was previously suggested that the function of OprH is to provide increased stability to the outer membranes of P. aeruginosa by directly interacting with lipopolysaccharide (LPS) molecules. Using in vivo and in vitro biochemical assays we show that OprH indeed interacts with LPS in P. aeruginosa outer membranes. Based upon NMR chemical shift perturbations observed upon addition of LPS to OprH in lipid micelles, we conclude that the interaction is predominantly electrostatic and localized to charged regions near both rims of the barrel, but also through two conspicuous tyrosines in the middle of the bilayer. These results provide the first molecular structure of OprH and offer evidence for multiple interactions between OprH and LPS that likely contribute to the antibiotic resistance of P. aeruginosa.
-
===Solution structure of outer membrane protein H (OprH) from P. aeruginosa in DHPC micelles===
+
Structural basis for the interaction of lipopolysaccharide with OprH from Pseudomonas aeruginosa.,Edrington TC, Kintz E, Goldberg JB, Tamm LK J Biol Chem. 2011 Aug 24. PMID:21865172<ref>PMID:21865172</ref>
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 2lhf" style="background-color:#fffaf0;"></div>
-
<!--
+
==See Also==
-
The line below this paragraph, {{ABSTRACT_PUBMED_21865172}}, adds the Publication Abstract to the page
+
*[[Porin 3D structures|Porin 3D structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 21865172 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_21865172}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
[[2lhf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LHF OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:021865172</ref><references group="xtra"/>
+
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Edrington, T C.V.]]
+
[[Category: Edrington TCV]]
-
[[Category: Tamm, L K.]]
+
[[Category: Tamm LK]]
-
[[Category: Beta-barrel]]
+
-
[[Category: Membrane protein]]
+

Current revision

Solution structure of outer membrane protein H (OprH) from P. aeruginosa in DHPC micelles

PDB ID 2lhf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools