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3sbb

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[[Image:3sbb.jpg|left|200px]]
 
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==Disulphide-mediated Tetramer of T4 Lysozyme R76C/R80C by Synthetic Symmetrization==
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The line below this paragraph, containing "STRUCTURE_3sbb", creates the "Structure Box" on the page.
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<StructureSection load='3sbb' size='340' side='right'caption='[[3sbb]], [[Resolution|resolution]] 1.43&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3sbb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpt4 Bpt4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SBB FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3sb5|3sb5]], [[3sb6|3sb6]], [[3sb7|3sb7]], [[3sb8|3sb8]], [[3sb9|3sb9]], [[3sba|3sba]]</div></td></tr>
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{{STRUCTURE_3sbb| PDB=3sbb | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">E ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10665 BPT4])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sbb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sbb OCA], [https://pdbe.org/3sbb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sbb RCSB], [https://www.ebi.ac.uk/pdbsum/3sbb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sbb ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/LYS_BPT4 LYS_BPT4]] Helps to release the mature phage particles from the cell wall by breaking down the peptidoglycan.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Combining the concepts of synthetic symmetrization with the approach of engineering metal binding sites, we have developed a new crystallization methodology termed metal-mediated synthetic symmetrization. In this method, pairs of histidine or cysteine mutations are introduced on the surface of target proteins, generating crystal lattice contacts or oligomeric assemblies upon coordination with metal. Metal-mediated synthetic symmetrization greatly expands the packing and oligomeric assembly possibilities of target proteins, thereby increasing the chances of growing diffraction-quality crystals. To demonstrate this method, we designed various T4 lysozyme (T4L) and maltose-binding protein (MBP) mutants and co-crystallized them with one of three metal ions: copper (Cu(2+) ), nickel (Ni(2+) ) or zinc (Zn(2+) ). The approach resulted in 16 new crystal structures - 8 for T4L and 8 for MBP - displaying a variety of oligomeric assemblies and packing modes, representing in total 13 new and distinct crystal forms for these proteins. We discuss the potential utility of the method for crystallizing target proteins of unknown structure by engineering in pairs of histidine or cysteine residues. As an alternate strategy, we propose that the varied crystallization-prone forms of T4L or MBP engineered in this work could be used as crystallization chaperones, by fusing them genetically to target proteins of interest.
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===Disulphide-mediated Tetramer of T4 Lysozyme R76C/R80C by Synthetic Symmetrization===
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An approach to crystallizing proteins by metal-mediated synthetic symmetrization.,Laganowsky A, Zhao M, Soriaga AB, Sawaya MR, Cascio D, Yeates TO Protein Sci. 2011 Sep 6. doi: 10.1002/pro.727. PMID:21898649<ref>PMID:21898649</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3sbb" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_21898649}}, adds the Publication Abstract to the page
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*[[Lysozyme 3D structures|Lysozyme 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 21898649 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_21898649}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Bpt4]]
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[[3sbb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SBB OCA].
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[[Category: Large Structures]]
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==Reference==
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<ref group="xtra">PMID:021898649</ref><references group="xtra"/>
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[[Category: Enterobacteria phage t4]]
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[[Category: Lysozyme]]
[[Category: Lysozyme]]
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[[Category: Cascio, D.]]
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[[Category: Cascio, D]]
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[[Category: Laganowsky, A.]]
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[[Category: Laganowsky, A]]
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[[Category: Sawaya, M R.]]
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[[Category: Sawaya, M R]]
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[[Category: Soriaga, A B.]]
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[[Category: Soriaga, A B]]
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[[Category: Yeates, T O.]]
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[[Category: Yeates, T O]]
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[[Category: Zhao, M.]]
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[[Category: Zhao, M]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Metal-mediated synthetic symmetrization]]
[[Category: Metal-mediated synthetic symmetrization]]
[[Category: Synthetic symmetrization]]
[[Category: Synthetic symmetrization]]

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Disulphide-mediated Tetramer of T4 Lysozyme R76C/R80C by Synthetic Symmetrization

PDB ID 3sbb

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