This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3tqu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3tqu" [edit=sysop:move=sysop])
Current revision (13:36, 14 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3tqu.jpg|left|200px]]
 
-
<!--
+
==Structure of a HAM1 protein from Coxiella burnetii==
-
The line below this paragraph, containing "STRUCTURE_3tqu", creates the "Structure Box" on the page.
+
<StructureSection load='3tqu' size='340' side='right'caption='[[3tqu]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3tqu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Coxiella_burnetii_RSA_493 Coxiella burnetii RSA 493]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TQU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TQU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3tqu| PDB=3tqu | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tqu OCA], [https://pdbe.org/3tqu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tqu RCSB], [https://www.ebi.ac.uk/pdbsum/3tqu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tqu ProSAT]</span></td></tr>
-
 
+
</table>
-
===Structure of a HAM1 protein from Coxiella burnetii===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/IXTPA_COXBU IXTPA_COXBU] Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.[HAMAP-Rule:MF_01405]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[3tqu]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Coxiella_burnetii Coxiella burnetii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TQU OCA].
+
[[Category: Coxiella burnetii RSA 493]]
-
[[Category: Coxiella burnetii]]
+
[[Category: Large Structures]]
-
[[Category: Nucleoside-triphosphate diphosphatase]]
+
[[Category: Burshteyn F]]
-
[[Category: Burshteyn, F.]]
+
[[Category: Cassidy M]]
-
[[Category: Cassidy, M.]]
+
[[Category: Cheung J]]
-
[[Category: Cheung, J.]]
+
[[Category: Franklin MC]]
-
[[Category: Franklin, M.]]
+
[[Category: Gary E]]
-
[[Category: Gary, E.]]
+
[[Category: Love J]]
-
[[Category: Love, J.]]
+
[[Category: Rudolph M]]
-
[[Category: Rudolph, M.]]
+
-
[[Category: Ham1 protein]]
+
-
[[Category: Hydrolase]]
+

Current revision

Structure of a HAM1 protein from Coxiella burnetii

PDB ID 3tqu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools